Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03050 ATGAGCAAGTTGGGTGTGGGTTCGGACTTTCACAACTTCAAGTATATGATCAAGCCCAAATTGGAGGACCCTATCTGCGTCAACGATGGACAATGGACTACGACTTTGCAAAGGAGAAAATATGATACCGGTTGGTTGTATTCGATTAGGTCATTGGAGGCACTAGACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGCGCACGTCATGTTCTTCTATGCAAAAGCAAGTTGGGTGTGGGTGCGCACTTTCACTACTTCAAGTATATGATCGAGCCCAAATTGGAGGACTCTATCTACGTCACCGGTGGACAATGGATTATGACTTTGCAAAGGAGAAAATCTGATACCAGTTGGTTGTATTCGGAAACAGGGGCTGCGCCAAAGAAATTAAAGTTAAAACCGGATTGGGTCAAAGCCCAAAAGGGAGGAAGTAATGAAAAGGAAAAAGGGGGTGCACAAAGGAATTATAACTTTAAAACTGAATCAGGTTTAGGCCCAAAAGGAAAATGGGGTGGTGAAGATGAAAGTAGGGGTGCTGCAAAAGAGATCTTTTGA 561 0.4278 MSKLGVGSDFHNFKYMIKPKLEDPICVNDGQWTTTLQRRKYDTGWLYSIRSLEALDKLFEQFLGDFMSARHVLLCKSKLGVGAHFHYFKYMIEPKLEDSIYVTGGQWIMTLQRRKSDTSWLYSETGAAPKKLKLKPDWVKAQKGGSNEKEKGGAQRNYNFKTESGLGPKGKWGGEDESRGAAKEIF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03050 186 MobiDBLite consensus disorder prediction 139 156 - -
Vimu3g03050 186 MobiDBLite consensus disorder prediction 170 186 - -
Vimu3g03050 186 Gene3D RNA Cap, Translation Initiation Factor Eif4e 62 128 IPR023398 -
Vimu3g03050 186 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 65 122 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu3g03050 186 MobiDBLite consensus disorder prediction 139 186 - -
Vimu3g03050 186 Pfam Eukaryotic initiation factor 4E 65 121 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu3g03050 186 SUPERFAMILY eIF4e-like 65 122 IPR023398 -
Vimu3g03050 186 SUPERFAMILY eIF4e-like 2 49 IPR023398 -
Vimu3g03050 186 Gene3D RNA Cap, Translation Initiation Factor Eif4e 1 61 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03050 Vimu-Chr3 44373150 44374873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03050 2 52 Eukaryotic Initiation Factors Gene Family AT4G18040 52.941 1.30e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03050 K03259 - gmx:100793288 75.8701