Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03026 TGCTCTTCACTCTCTTTCACCGCACTTTCTGGTGTTAGGGTTTCTCTGTCAATCAGCGCCAGAGATATGGCTCCCAAACCGCCTAGTACGGGCCTTTTTGTTGGACTGAACAAGGGTCACGTCGTCACCAAGAAGGAATTGCCTCCACGCCCCTCAGATCGCAAGGGGAAAACAAGCAAAAGGGTGCACTTTGTGAGGAATCTCATAAGAGAGGTTGCTGGTTTTGCACCGTATGAGAAGCGTATAACTGAGTTGCTTAAGGTTGGGAAGGATAAGAGGGCACTTAAGGTTGCCAAGAGAAAGCTTGGAACTCACAAACGTGCCAAGAAGAAGCGTGAGGAGATGTCCAACGTTCTCCGCAAAATGAGGGCTGGTGGAGCTGGAGACAAGAAGAAATAA 399 0.4912 CSSLSFTALSGVRVSLSISARDMAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03026 132 MobiDBLite consensus disorder prediction 101 132 - -
Vimu3g03026 132 Pfam Ribosomal protein L36e 30 123 IPR000509 GO:0003735|GO:0005840|GO:0006412
Vimu3g03026 132 FunFam 60S ribosomal protein L36 23 128 - -
Vimu3g03026 132 Gene3D 60S ribosomal protein L36 22 130 IPR038097 -
Vimu3g03026 132 PANTHER 60S RIBOSOMAL PROTEIN L36 15 130 IPR000509 GO:0003735|GO:0005840|GO:0006412
Vimu3g03026 132 MobiDBLite consensus disorder prediction 109 132 - -
Vimu3g03026 132 ProSitePatterns Ribosomal protein L36e signature. 77 87 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03026 Vimu-Chr3 44176151 44177178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03026 29 132 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 84.615 7.84e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03026 K02920 - gmx:100785591 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03026 3 44176151 44177178 Vimu3g03026 3 44176151 44177178 ECH