Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03004 ATGAACACCTTATTCCCCATACCCTCTATCCTTCTCCTTCTCCTTCTCCTTCTCACACCCTTCTCAGTTTCATTCTCTCCCACAGATAACTTTCTTCTCAGTTGTGGATCACACAACAATGCTTCCCTCTTCAACAGAGTCTTCACGGGCGATTCCACCAACCCAAGTTCCAATTTTCTCTCTTCAGGTGATTCTGTTTCACTCGCATATCAAAAGCCACCTCAGAATTTGCCCACTTTGTACCACACAGCAAGAGTTTTCAGCAGCAGTGGGAGCTACAGGTTCAATATGAAGAAAAACGGCACCCACTTTGTTCGTTTTCATTTCTCCCCCTTCAAGGCTCAAAGTTTTGATCTAAAATCAGCAAAGTTTAGTATCTTTGTTAATGGGGCTTCGGTGCTGAGCAATTTCCAGCCACCTAATGATGTTCTTCTCAAAGAGTTCATTCTAAACATAGAGTCAAACTTTCTTGAGATTTTGTTTAGGCCTGTTGGTGACTCAGGTTTTGCCTTTGTCAATGCTTTGGAGGTGTTTACTGCCCCTGTGGATTTTATCATAGATTTTGGAGCCAGGGCGGTTGGTCCTTCTGGGGTGGAAGAGTACCGAAACCTTTCATCTATGGTTTTGGAAACTGTTCATAGGATCAATGTTGGGGGTTTGAAAATAACTCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATTTGGTGTTTAAGGGTGCAGCAAAGCCTGCAGTGAGCACTCACATACCAAAATACCAGAAGGGAGGTGCAACTAGAGAGATTGCACCTGAAAATGTTTACATGACTGCTCAGCAGATGAATAGGGAAAACTCAAGTTTGGCTTCTAGGTTCAACATAACCTGGAACTTCCCTGTGTCTCCTGGTGGTGTTCCACACTTGGTTCGATTGCATTTCTGCGATATTGTTAGTCCTGCTCTCAACTTGCTCTACTTTGATGTGTACATCAATGGGTACATTGCATACAAGGATCTTGATTTGTCAGCGCTTACCATCCACACGCTTGCATCACCTGTCTATGTGGATTTTGTTACAAATTCAGATGACTCGGGTTTTGTTCAAGTGAGTGTTGGTCCTTCTGAGCTAAGCAGTTCCATAAGGATGAATGCCATATTGAATGGTGCAGAGATAATGGAGATGCTCAATGATGTCCGTACTAAAGTTGTGCATAGGAGGAAGAATTTGTGGGTGTTGGTGGGTTCAGTTGTTGGAGGAATTGTTGTCTTTTTTTTAGTTGTAACTGCTTTTCTACTTGGTACCAAATGCAGGAACAAGAAACCAAAACAAAGGACATTGGAAAGTGTTGGATGGACACCTTTAAGCATGTTTGGAGGGAGTTCCCTCAGTAGAAGCTCCGAGCCTGGTTCACATGGACTTCTTGGCTTGAAGATTCCTTTTGCTGAAATAAAATCAGCGACAAACAACTTCGATAGAAATTTGATTATAGGGTCTGGTGGGTTTGGTATGGTGTACAAAGGAGTGTTCAGAGACAATACAAAGGTTGCTGTCAAGAGAGGCATGCCAGGGTCCAGACAGGGCCTTCCCGAGTTCCAAACTGAGATAACTGTTTTGTCCAAAATTCGCCATCGCCACCTTGTTTCACTGGTTGGTTTCTGTGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTTGAAAAGGGTCCGCTGAAGAAGCATTTATATGGCTCATCACGACAGACACCTCTCTCTTGGAAGCAGCGTCTT 1761 0.4321 MNTLFPIPSILLLLLLLLTPFSVSFSPTDNFLLSCGSHNNASLFNRVFTGDSTNPSSNFLSSGDSVSLAYQKPPQNLPTLYHTARVFSSSGSYRFNMKKNGTHFVRFHFSPFKAQSFDLKSAKFSIFVNGASVLSNFQPPNDVLLKEFILNIESNFLEILFRPVGDSGFAFVNALEVFTAPVDFIIDFGARAVGPSGVEEYRNLSSMVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLVFKGAAKPAVSTHIPKYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVSPGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALTIHTLASPVYVDFVTNSDDSGFVQVSVGPSELSSSIRMNAILNGAEIMEMLNDVRTKVVHRRKNLWVLVGSVVGGIVVFFLVVTAFLLGTKCRNKKPKQRTLESVGWTPLSMFGGSSLSRSSEPGSHGLLGLKIPFAEIKSATNNFDRNLIIGSGGFGMVYKGVFRDNTKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQTPLSWKQRL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03004 587 PANTHER OS03G0124300 PROTEIN-RELATED 7 449 IPR046957 GO:0004672
Vimu3g03004 587 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Vimu3g03004 587 ProSiteProfiles Protein kinase domain profile. 487 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu3g03004 587 Pfam Malectin-like domain 33 390 IPR024788 -
Vimu3g03004 587 FunFam receptor-like protein kinase FERONIA 456 562 - -
Vimu3g03004 587 Gene3D Phosphorylase Kinase; domain 1 460 562 - -
Vimu3g03004 587 Pfam Protein tyrosine and serine/threonine kinase 492 578 IPR001245 GO:0004672|GO:0006468
Vimu3g03004 587 FunFam Putative receptor-like protein kinase 30 181 - -
Vimu3g03004 587 FunFam Receptor-like protein kinase FERONIA 208 393 - -
Vimu3g03004 587 SUPERFAMILY Protein kinase-like (PK-like) 470 586 IPR011009 -
Vimu3g03004 587 Gene3D - 30 183 - -
Vimu3g03004 587 Gene3D - 208 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03004 Vimu-Chr3 44010818 44012609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03004 10 587 Receptor kinase-like Gene Family AT3G46290 41.554 5.64e-135 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vimu3g03004 Malectin_like 9.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03004 - - gmx:100801169 1041.57