Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02946 ATGGAGATTGAAACGAAGGACTTTGATTACTCAAAGCGATCTCAGTGGCTGCGTGCTGCTGTGCTAGGAGCGAATGACGGGTTGGTCTCAACAGCATCTCTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATAAAAGTTATGATCCTAACAGGGTTTGCAGGGCTAGTGGCTGGTGCATGCAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCGCAGGCAGCAGCAGCCTCAGCTTTAGCATTTTCTGTTGGTGCAATTGTTCCTCTTCTTGCAGCCTCTTTCATAAGGGAATATAAGGTGAGGATTGGTGTGGTTTTGGGAGCAGTGAGCTTAGCTCTTGTGGTGTTTGGTTGGCTTGGGGCAGTGTTGGGAGTCTTGGTTGGGGGTTGGCTAGCCATGGCCATAACTTTTGGACTAACCAAGTTGATTGGGTCAAGTGGTCTTTAG 453 0.4923 MEIETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQAAAASALAFSVGAIVPLLAASFIREYKVRIGVVLGAVSLALVVFGWLGAVLGVLVGGWLAMAITFGLTKLIGSSGL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02946 150 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 74 145 IPR008217 GO:0005384|GO:0030026
Vimu3g02946 150 Pfam VIT family 17 75 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02946 Vimu-Chr3 43503682 43504263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02946 4 150 Nodulin-like Gene Family AT3G43660 66.120 5.92e-78 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02946 K22736 - gmx:100814343 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02566 8 34788231 34789495 Vimu3g02946 3 43503682 43504263 PCT