Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02915 ATGGCATCTTCCAAGTTAATGGCTTCTTCCCATTCACGGAACTCAGAGTCCTCCTCTCCTTCTCCCACGCCTCAATTCACCACCACCAACTTCATCCCCATCTCCGACGCTGCCGTCACCGCCGCCCCTAAGACCGTCGATGATGTATGGCGGGAGATCGTGGCCGGAGACCGCCGCGAATGCAAGGAGGAGGCTCCTGACGACGAGATGATGACTCTCGAAGACTTCCTCGCCAAGGCTGGTGCAGTCGACGATGACAACAATGAAGAAGTCGATTGCGACATGAAGATTCCAATGCCCCTCACGGAGAGGCTTGGCAGCGGCGTGTTCGCCTTCGATCCCCTCCTCGCCGCGACGCCGTTTCAGGATGGAGTGGAAGGCTCCGTCATAGGGTTCGGGAACGGCGTGGAGGTGGTTGAAGGCGGGAGAGGAAAGAGAGCACGTCCCGTTTTGGAACAGTTGGATAAGGCAGCGCAACAGAGACAGAGGAGGATGATTAAAAACAGAGAATCTGCTGCTAGGTCTCGGGAACGCAAGCAGGCTTACCAGGTGGAATTAGAGTCCTTGGCGGTGAAACTAGAGGAGGAAAACGACAAGCTCTTGAAGGAAAAGGCCGAGAGGAAAAAAGAGAGGTACAAGCAGCTAATGGAAAAAGTACTCCCTGTAGCGCAGAAACAAAAGCCACCGTGTATACTCCGCAGGGCTCGCTCCTTGCAGTGGTAG 723 0.5519 MASSKLMASSHSRNSESSSPSPTPQFTTTNFIPISDAAVTAAPKTVDDVWREIVAGDRRECKEEAPDDEMMTLEDFLAKAGAVDDDNNEEVDCDMKIPMPLTERLGSGVFAFDPLLAATPFQDGVEGSVIGFGNGVEVVEGGRGKRARPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQLMEKVLPVAQKQKPPCILRRARSLQW 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02915 240 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 158 210 IPR004827 GO:0003700|GO:0006355
Vimu3g02915 240 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 40 216 IPR043452 GO:0003700|GO:0045893
Vimu3g02915 240 Coils Coil 179 218 - -
Vimu3g02915 240 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 158 219 - -
Vimu3g02915 240 Pfam bZIP transcription factor 158 217 IPR004827 GO:0003700|GO:0006355
Vimu3g02915 240 Gene3D - 158 206 - -
Vimu3g02915 240 SMART brlzneu 156 218 IPR004827 GO:0003700|GO:0006355
Vimu3g02915 240 SUPERFAMILY Leucine zipper domain 160 211 IPR046347 GO:0003700|GO:0006355
Vimu3g02915 240 CDD bZIP_plant_BZIP46 160 206 - -
Vimu3g02915 240 MobiDBLite consensus disorder prediction 1 29 - -
Vimu3g02915 240 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 163 178 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02915 12 240 bZIP Transcription Factor Family AT5G44080 52.301 3.86e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu3g02915 bZIP_1 9.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02915 K14432 - gmx:100808917 310.071