Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02905 ATGTTGATATTATGGAACCTGTATTCATTTAACCGTATATATTATTTTATATCAGAGCTTCACAAGAAGGAAACTTGTGAGCCTGTGACAATTATTGAGACCCCTCCCATGGTTGTTGTTGGTGTTGTGGGTTATGTGAAAACTCCCCGCGGGCTTCGTACCTTGAACACTGTGTGGGCTCAGCACTTGAGCGAGGAACTGAAGCGTAGGTTCTATAAGAATTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAGTACTCAAAGCAGTATGAAACTGACGAGGGGAAGAAGAACATTGAGACTCAGCTGGAGAAACTAAAGAAGTATGCTACTGTGATTCGTGTTTTGGCTCACACTCAGGTGCTTTTTTTTTTTTTTAATTTTATTTCATTTTTTCCGTTGGTGGTTTTATACATGGAAATTTGGGCTTGTCGTCATGTTTAA 444 0.4009 MLILWNLYSFNRIYYFISELHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKQYETDEGKKNIETQLEKLKKYATVIRVLAHTQVLFFFFNFISFFPLVVLYMEIWACRHV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02905 147 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 18 121 IPR045077 GO:0003735|GO:0005840|GO:0006412
Vimu3g02905 147 SUPERFAMILY Translation proteins 18 123 IPR009000 -
Vimu3g02905 147 Gene3D Translation factors 18 35 - -
Vimu3g02905 147 Pfam Ribosomal protein L3 17 121 IPR000597 GO:0003735|GO:0005840|GO:0006412
Vimu3g02905 147 Gene3D - 36 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02905 Vimu-Chr3 43142706 43143149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02905 18 121 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 83.654 4.38e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02905 K02925 K10999 gmx:100806786 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02905 3 43142706 43143149 Vimu3g02905 3 43142706 43143149 ECH