Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02895 ATGATGGCTAGTGTTAGTGGCATTGCTACCAACACTTCCTTCTGCATTTTCTTAGTGCTTTCTTCCTTACTTTTTGCTTCCTCTCAAGCACTTGAAAGGCCTCCAATTGTGAATGGATTATCATGGAACTACTATTTCAAGAACTGTCCAAGGCTTGAGAGGATAGTCAGAAGCCATCTCCAGAAGGTCTTCAAACAAGACAATGGTCAAGCACCTGCCTTACTCAGGATCTTCTTCCATGACTGTTTTGTTCAGGGTTGTGATGGGTCGATATTGTTGGATGGAATTCCTAACGAAAAGGATCAACCGGCAAACATAGGGATAAGGCCAGAGGCGTTGCAGACTATTGAAGACCTTCGATCTCTTGTTCACAACCACTGTGGAAGAGTTGTCTCTTGCGCTGACCTCGTTGTTCTAGCAGCACGTGAAGCTGTTTCTCTGTCTGGAGGTCCAAAATTTGCAGTGCCATTGGGAAGAAAGGACGGTCTAACCTTCAGCATAAACGGCACAAGAAACCTTCCACCGCCGTCCTCCAGAACCGGCAAACTCCTCGAAACGTTCGCCGCCAGAAATTTCAGCGCAACCGACGTGGTGGCGCTCTCCGGCGCGCACACATTCGGGCGGGCCCACTGCTCCACATTCTTCAGCCGAATCAACCAGACGGATCCACCAATCGACCCGTCGTTGGCGAAGAACCTGAGCAACACGTGTCCGAGTGCGCAGTCTCCGAACACGGCGGTGCTGGACGTGCGAACCCCTAACGTTTTCGACAACAAATACTACGTGAACCTGGCGAACAGGCAGGGCCTGTTCACCTCGGACCAGGACCTGTTTAGCGACTCGAGGACAAAAGGGATTGTGAACTCCTTTGCTTCCAATGAGAAACTGTTCTTCGACAGTTTTGCCGATGCGGTGGTGAAGTTGAGCCAGTTGGATGTGTTGACGGGGAAACAAGGACAGGTTCGCGCCAAATGCTCCGTGGCCAACACGAGGAAGGAGGCTTTGGTGGTGGAAGAAGCTGTGAATTTAGGCGGTCACATGTCACATTAA 1050 0.5067 MMASVSGIATNTSFCIFLVLSSLLFASSQALERPPIVNGLSWNYYFKNCPRLERIVRSHLQKVFKQDNGQAPALLRIFFHDCFVQGCDGSILLDGIPNEKDQPANIGIRPEALQTIEDLRSLVHNHCGRVVSCADLVVLAAREAVSLSGGPKFAVPLGRKDGLTFSINGTRNLPPPSSRTGKLLETFAARNFSATDVVALSGAHTFGRAHCSTFFSRINQTDPPIDPSLAKNLSNTCPSAQSPNTAVLDVRTPNVFDNKYYVNLANRQGLFTSDQDLFSDSRTKGIVNSFASNEKLFFDSFADAVVKLSQLDVLTGKQGQVRAKCSVANTRKEALVVEEAVNLGGHMSH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02895 349 SUPERFAMILY Heme-dependent peroxidases 35 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 CDD secretory_peroxidase 39 327 IPR033905 GO:0004601|GO:0042744
Vimu3g02895 349 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Vimu3g02895 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Vimu3g02895 349 PANTHER - 18 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 Pfam Peroxidase 56 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 Gene3D Peroxidase, domain 2 175 309 - -
Vimu3g02895 349 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 Gene3D - 43 326 - -
Vimu3g02895 349 FunFam Peroxidase 43 185 - -
Vimu3g02895 349 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02895 349 FunFam Peroxidase 174 308 - -
Vimu3g02895 349 ProSiteProfiles Plant heme peroxidase family profile. 39 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02895 Vimu-Chr3 43069218 43070957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02895 9 341 Peroxidase AT1G71695 52.436 1.18e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02895 K00430 - gmx:100804126 543.117