Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu3g02875 | TTGAACTCAGAAAAGCTCAGCCACCGCACTACCACCGCTGAGGTATTCTCCTTTGTTATTATTACCTGTAAGCAGTCACGCGAATCATGGAAACCAACAACAGTGCATGCACCACAAGTGCCAGAACTTAGATGGCCATGCCACCATTTCCACCACCATTTGCATAGCATCATCGCAAGCTTAGCTTTGATTCTACCATTTGGTAGTAGTGAGAGCAGAGCCACTTTCTGGGCTTCAGCTTCACTAATCACCATCATTCAACAGCTGCAAGACTGTCGTGGTGACCCTATAACCAACACTCCATTACACCAAGTTCTTAATCTCCAAAACCAAGCCATTTTCGTAGTCCAAATGGAAAGCATTGTTCCCCGGAGTGTTACCGCTTTGTTATTTTCCATGATATTTTTCTGCCTCACCCTGACAAAGATAGGAGTCACTTGTCTCTCACCCGATGGACAAGCCCTTCTTTCTCTTCTGCCTGCAGCAGGCCCTGATGCAAAATCATCACCTGTTCTCTCCTCATGGAACCCATCAAGCTCAACACCATGTTCATGGAAAGGTATCACTTGCTCCCCACAAGGTAGAGTAATCTCCCTCTCTATTCCAGATACTTTTCTCAACCTCTCCTATTTACCTCCTCGGCTATCCTCTTTATCAATGCTTCAACTTCTCAATCTCTCTTCCACCAATGTCTCTGGCACCATTCCACCCTCTTTTGGTCAACTTTTCCATCTTCAGCTGCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATACCTGCTGAACTGGGAAGCCTCTCTTCACTTCAATTCCTTTTCTTGAACTCCAACAGATTGACAGGAAGCATTCCTCAACATCTTTCTAATCTCACTTCACTTGAAGTTCTCTGCCTCCAAGACAATCTTCTCAACGGCTCAATCCCATCACAGCTAGGCTCTTTGACATCTCTGCAGCAGTTTCGGATAGGGGGAAATCCATATCTCACTGGACAAATCCCTTCACAGTTAGGCCTACTCACCAACCTCACCACTTTTGGCGCAGCTGCCACGGGACTTTCTGGTGCCATTCCCTCTACATTTGGTAACTTGATCAATCTACAGACTCTAGCACTTTATGATACTGAAATTTCTGGCTCAATGCCACCAGAACTTGGGTTGTGTTCTGAGCTGAGAAATCTGTATCTGCACATGAATAAGCTCACTGGTTCTATCCCTCCGCAATTGAGCAAGTTGCAAAAACTTACTAGCTTGCTACTTTGGGGCAATGCCTTAACTGGTCCAATCCCAGCAGAGCTTTCCAACTGTTCATCACTTGTTATATTTGATGTCTCTTCTAATGACCTCTCTGGTGAAATACCGGGGGACTTTGGGAAGCTGGTGGTTCTGGAACAGCTTCATCTATCTGATAATTCACTCACAGGTAAAATACCATGGCAGTTGAGCAACTGTACCAGCCTTTCTACTGTTCAGCTCGACAAGAATCAGTTATCAGGTACTATTCCCTGGGAGTTAGGTAAATTAAAGGTTCTACAGAGCTTTTTCTTATGGGGTAATCTAGTGTCTGGAACCATACCATCATCCTTTGGAAACTGCACAGAACTCTACGCACTTGACCTTTCAAGGAATAAGCTAACAGGTTCTATACCAGAAGAGATTTTCGGCTTGAAGAAGCTGAGTAAGCTTCTGCTTCTGGGAAATTCATTAACAGGAGGATTGCCACCAAGTGTTGCAAATTGCCAGTCTTTGGTGAGGTTGAGGGTTGGAGAGAACCAGCTTTCAGGCCAGATTCCTAAAGAGATAGGTCAATTGCAGAATCTGGTGTTCCTCGACCTGTACATGAACCATTTCTCTGGAAGCATACCAGTGGAGATTGCTAATATCACAGTTCTTGAGCTGTTAGATGTTCACAACAACTACCTCACTGGGGAAATTCCATCTGTGATTGGGGAGCTTGAAAATTTGGAGCAGCTTGATCTCAGTAGAAACAGTTTGACAGGAGAAATTCCTTGGAGCTTCGGAAACTTCAGCTATTTGAACAAGCTCATCCTCAACAATAATGTACTGACAGGACCAATCCCAAAATCCATTAGAAATTTGCAGAAGTTAACTCTTCTGGATTTGAGTTACAATAGCCTCTCTGGTGGCATACCCCCAGAGATTGGTCATGTTACAAGCTTAACCATCAGCTTGGACTTGAGCTACAATTCATTTACAGGAGAAATCCCAGAATCAGTGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTCATAACATGCTTTATGGAGAAATCAAGGTTCTGGGGTCTCTCACTAGCCTCACCTCTCTCAATATCTCCTACAACAATTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACACTATCCTTCAATTCATATATTCAGAACCCTGGGCTTTGTCAGTCCATTGATGGGGCTATCTGTTCTTCTAGTCTGATTCGAAAAAATGGTTTGAAATCTGCAAAAACCATTGCTTTGATCACAGTCATTCTAGCCTCGGTTACTATAATTCTCATTGCTTCCTGGATTCTAGTAACTCGTAATCATGGATACAAGGTTGAAAAAACATTGGGGGCATCAACTTCCACATCAGGAACTGAAGATTTCTCTTATCCTTGGACTTTCATCCCATTTCAGAAAGTAAACTTCAGCATCGATAGTATCTTGGATTGCTTGAAGGATGAAAATGTTATTGGAAAGGGCTGCTCAGGTGTTGTGTACAAGGCTGAGATGCCAAATGGGGAGTTGATTGCGGTAAAGAAGCTTTGGAAAGCAAGCAAAGCAGATGAAATAGTGGATTCTTTTGCTGCAGAGATACAGATTCTTGGATACATTCGGCATAGGAACATAGTGCGGCTCATAGAATATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTCTATAGTTATGGGGTGGTTTTGCTAGAGATTCTAAGTGGTCGCAGTGCTGTTGAATCCCATGTTGCAGATGGCCAACACATAGTGGAATGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCTATATCAATACTAGACACAAAGCTGCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAACTCTTCCCCATCAGAGCGCCCCACAATGAAGGAAGTGGTTGCACTACTGATGGAGGTGAAGAGCCAGCCTGAGGAGATGGGCAAGACCTCTCAACCTCTAATAAAACAGTCCTTAAATCAAAACTGA | 3273 | 0.4366 | MNSEKLSHRTTTAEVFSFVIITCKQSRESWKPTTVHAPQVPELRWPCHHFHHHLHSIIASLALILPFGSSESRATFWASASLITIIQQLQDCRGDPITNTPLHQVLNLQNQAIFVVQMESIVPRSVTALLFSMIFFCLTLTKIGVTCLSPDGQALLSLLPAAGPDAKSSPVLSSWNPSSSTPCSWKGITCSPQGRVISLSIPDTFLNLSYLPPRLSSLSMLQLLNLSSTNVSGTIPPSFGQLFHLQLLDLSSNSLTGSIPAELGSLSSLQFLFLNSNRLTGSIPQHLSNLTSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLTGQIPSQLGLLTNLTTFGAAATGLSGAIPSTFGNLINLQTLALYDTEISGSMPPELGLCSELRNLYLHMNKLTGSIPPQLSKLQKLTSLLLWGNALTGPIPAELSNCSSLVIFDVSSNDLSGEIPGDFGKLVVLEQLHLSDNSLTGKIPWQLSNCTSLSTVQLDKNQLSGTIPWELGKLKVLQSFFLWGNLVSGTIPSSFGNCTELYALDLSRNKLTGSIPEEIFGLKKLSKLLLLGNSLTGGLPPSVANCQSLVRLRVGENQLSGQIPKEIGQLQNLVFLDLYMNHFSGSIPVEIANITVLELLDVHNNYLTGEIPSVIGELENLEQLDLSRNSLTGEIPWSFGNFSYLNKLILNNNVLTGPIPKSIRNLQKLTLLDLSYNSLSGGIPPEIGHVTSLTISLDLSYNSFTGEIPESVSALTQLQSLDLSHNMLYGEIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSFNSYIQNPGLCQSIDGAICSSSLIRKNGLKSAKTIALITVILASVTIILIASWILVTRNHGYKVEKTLGASTSTSGTEDFSYPWTFIPFQKVNFSIDSILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKASKADEIVDSFAAEIQILGYIRHRNIVRLIEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVADGQHIVEWVKRKMGSFEPAISILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPSERPTMKEVVALLMEVKSQPEEMGKTSQPLIKQSLNQN | 1090 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu3g02875 | 1090 | Gene3D | Ribonuclease Inhibitor | 598 | 696 | IPR032675 | - | |
Vimu3g02875 | 1090 | SUPERFAMILY | L domain-like | 524 | 792 | - | - | |
Vimu3g02875 | 1090 | Gene3D | Phosphorylase Kinase; domain 1 | 886 | 969 | - | - | |
Vimu3g02875 | 1090 | Gene3D | Ribonuclease Inhibitor | 307 | 402 | IPR032675 | - | |
Vimu3g02875 | 1090 | ProSiteProfiles | Leucine-rich repeat profile. | 750 | 772 | IPR001611 | GO:0005515 | |
Vimu3g02875 | 1090 | SUPERFAMILY | Protein kinase-like (PK-like) | 896 | 1068 | IPR011009 | - | |
Vimu3g02875 | 1090 | ProSitePatterns | Protein kinases ATP-binding region signature. | 907 | 930 | IPR017441 | GO:0005524 | |
Vimu3g02875 | 1090 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 501 | 596 | - | - | |
Vimu3g02875 | 1090 | Pfam | Protein tyrosine and serine/threonine kinase | 968 | 1064 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu3g02875 | 1090 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At1g34110 | 148 | 308 | - | - | |
Vimu3g02875 | 1090 | Pfam | Leucine rich repeat N-terminal domain | 149 | 191 | IPR013210 | - | |
Vimu3g02875 | 1090 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At1g34110 | 309 | 402 | - | - | |
Vimu3g02875 | 1090 | PANTHER | LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 | 442 | 622 | - | - | |
Vimu3g02875 | 1090 | Gene3D | Ribonuclease Inhibitor | 150 | 306 | IPR032675 | - | |
Vimu3g02875 | 1090 | Gene3D | Ribonuclease Inhibitor | 500 | 597 | IPR032675 | - | |
Vimu3g02875 | 1090 | Gene3D | Ribonuclease Inhibitor | 698 | 809 | IPR032675 | - | |
Vimu3g02875 | 1090 | Gene3D | Transferase(Phosphotransferase) domain 1 | 970 | 1068 | - | - | |
Vimu3g02875 | 1090 | Pfam | Protein kinase domain | 903 | 965 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g02875 | 1090 | SUPERFAMILY | RNI-like | 224 | 625 | - | - | |
Vimu3g02875 | 1090 | Pfam | Leucine rich repeat | 221 | 279 | IPR001611 | GO:0005515 | |
Vimu3g02875 | 1090 | Pfam | Leucine rich repeat | 510 | 568 | IPR001611 | GO:0005515 | |
Vimu3g02875 | 1090 | Gene3D | Ribonuclease Inhibitor | 403 | 499 | IPR032675 | - | |
Vimu3g02875 | 1090 | ProSiteProfiles | Protein kinase domain profile. | 901 | 1090 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g02875 | 1090 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 405 | 500 | - | - | |
Vimu3g02875 | 1090 | Pfam | Leucine Rich Repeat | 653 | 675 | IPR001611 | GO:0005515 | |
Vimu3g02875 | 1090 | Pfam | Leucine Rich Repeat | 462 | 483 | IPR001611 | GO:0005515 | |
Vimu3g02875 | 1090 | Pfam | Leucine Rich Repeat | 701 | 722 | IPR001611 | GO:0005515 | |
Vimu3g02875 | 1090 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 597 | 692 | - | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 290 | 314 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 699 | 723 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 266 | 289 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 242 | 265 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 459 | 483 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 651 | 674 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 411 | 435 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 531 | 555 | IPR003591 | - | |
Vimu3g02875 | 1090 | SMART | LRR_typ_2 | 748 | 775 | IPR003591 | - | |
Vimu3g02875 | 1090 | PRINTS | Leucine-rich repeat signature | 748 | 761 | - | - | |
Vimu3g02875 | 1090 | PRINTS | Leucine-rich repeat signature | 245 | 258 | - | - | |
Vimu3g02875 | 1090 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 693 | 817 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu3g02875 | Vimu-Chr3 | 42882285 | 42886265 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu3g02875 | 145 | 980 | Receptor kinase-like Gene Family | AT5G56040 | 43.929 | 0.0 | 629 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vimu3g02875 | PK_Tyr_Ser-Thr | 5.6e-06 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu3g02875 | - | - | gmx:100819611 | 1474.53 |