Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02871 ATGAGCACGACCATGCATTCCCATATTGAGACAATTCTGTGGAGCGAGGACCAAATTTCTCGCCGTGTCTCGGAGCTTGCCGCCGAAGTTTCCGCTGACTTTGCTGGTGGTTCTTCAGCGCCCATAGTCGTGGGTGTTGCCACGGGTGCCTTCCTCTTCTTGGCAGATTTTGTTCGCAAAATCGACTTCTCAGTATCCGTTGATTTCGTCCGAGCTGAATCCTACGGTTCAGGAACAGAGTCCAATGGCGCACCCACCATTTCCTTGGATTTGAAGGTCGACATCAACACTCGTCACGTTATCTTGGTTGAAGACATTGTAGATACCGGTCATACCTTATCTAGAGTCATTAAGCACTTGAAATCAAAAGGAGCATCCTCTGTTTCTGTGTGCACTTTTCTTGATAAACCTTCAAGGAGAAAAGTAAATGTTCAGCTGGTGGGTGAAGGAAAATTCTACCGTGGATTTGAGTGCCCAGACTGTTTTGTTGTCGGTTATGGAATGGATTTTGCCGAACAGTATAGAAATTTGCCTTACATTGGTGTTTTGAAGCCTGAACTTTACGAGTGA 570 0.4596 MSTTMHSHIETILWSEDQISRRVSELAAEVSADFAGGSSAPIVVGVATGAFLFLADFVRKIDFSVSVDFVRAESYGSGTESNGAPTISLDLKVDINTRHVILVEDIVDTGHTLSRVIKHLKSKGASSVSVCTFLDKPSRRKVNVQLVGEGKFYRGFECPDCFVVGYGMDFAEQYRNLPYIGVLKPELYE 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02871 189 FunFam Hypoxanthine phosphoribosyltransferase 4 189 - -
Vimu3g02871 189 Gene3D - 1 189 IPR029057 -
Vimu3g02871 189 SUPERFAMILY PRTase-like 4 189 IPR029057 -
Vimu3g02871 189 CDD PRTases_typeI 23 141 IPR000836 -
Vimu3g02871 189 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 188 - -
Vimu3g02871 189 NCBIfam hypoxanthine phosphoribosyltransferase 12 184 IPR005904 GO:0004422|GO:0006166
Vimu3g02871 189 Pfam Phosphoribosyl transferase domain 18 170 IPR000836 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02871 5 188 PRT Gene Family AT1G71750 63.590 3.17e-88 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02871 K00760 - gmx:100037484 319.316