Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02856 ATGGCGTGGGCCTTCCCAAGAGGGGGAGGAGGTCTTGCATGGAGAAACGGAAAGAACCAAATGGGCCGGGTCCCTATACCCGGGCCAAAAGGAGTCCCTCTCTTCGGCCTCTTGTTTAGCTTAAACCATGCCCTACCTCATCGCACCCTCGCTTCCATTGCTTCAGCCATATCCGCCACGAAACTCATGGCCTTTAGTTTGGGGTCAAGCCCAGTAGTTGTAACTTCCGACCCTCACGTGGCGCGTGAAATCTTGAACTCGCCCCATTTCGCTGACCGTCCCGTTAAACAATCCGCTAAGAGCCTCATGTTCAACCGCGCCATTGGGTTTGCCCCAAACGGTGCGTATTGGCGCTTGCTGCGGAGGGTAGCCTCAACACATCTCTTCTCCCCGCGCCGCATTCTTGCCCACGAGCCAGGTCGCTTACTAGACTGCGCTGCCATGTTACGGGCTATAGCTCACGAGCAGTCCAAAAACGGGTTCGTGTGCCTAAGAAAACACCTCCAAGATGCAGCGCTGAATAACGTTATGGGAACCGTCTTTGGAAGAAGGTACCACGACCAAGACGAGTGTTATAATCGGCGTGAGATTGAAGAGGTGCGCGACATGGTCCGGGAAGGTTTTGACCTTTTGGGAGCTTTCAACTGGTCTGATTACGTTCCTTGGATCCGCTTCTTTTATGACCCTTTACGTGTTCGAGAACGGTGCTCCGTTCTTGCTCCGAGAGTGAAGAAATTTGTAAAGAGGATTCTGGAGGAGCACCGAATAATGGCTCCATTCAAAGAACTTTCTGATGACTCGGACTTCGTGGACGTGCTGCTCTCTCTAGAAGAGGATGACAAGCTCGAAGACGATGACATCATTGCTGTTTTATGGGAGATGATATTTCGTGGCACGGATACAGCAGCACTTCTTACTGAGTGGGTAATGGCCGAGCTTATTTTGAATGAGCAAATGCAAACTAGGCTTCGCAATGAACTCCGCAGCGTTGTGGGAAACAAGATGGTAGTTACAGATGCTGATGTGATAAAATTGCCATACTTAGAAGCCATAGTGAAAGAAACCCTGCGATTGCATCCAATTGGGCCTCTCCTTTCATGGGCCCGATTGTCCACGTCAGATGTCCATCTGAGCAATGGAATGGTGGTCCCAGCCAACACCACAGCAATGGTGAACATGTGGGCCATTACTCATGACCCTAGCGTGTGGCACGAGCCACTAGTATTCAAGCCAGAGAGGTTTGTGAAGAGTGAAGGAGGGGTTGAAGTGGATATCAGAGGTGGCGACCTTAGACTTGCACCATTTGGAGCTGGACGAAGGGTTTGCCCCGGTAAAAACCTAGGGCTTGTGACTGTGAGCCTTTGGGTGGCTAACTTGGTTCATCGTTTTCATTGGTTTCAAGACATGGCTAACCCAGTTGACCTAGCCGAGGTTCTGAAACTATCTTGTGAAATGAAGAACCCTCTCAGAGCCCTGGCATCTCCAAGGTTTACTAATTAA 1500 0.506 MAWAFPRGGGGLAWRNGKNQMGRVPIPGPKGVPLFGLLFSLNHALPHRTLASIASAISATKLMAFSLGSSPVVVTSDPHVAREILNSPHFADRPVKQSAKSLMFNRAIGFAPNGAYWRLLRRVASTHLFSPRRILAHEPGRLLDCAAMLRAIAHEQSKNGFVCLRKHLQDAALNNVMGTVFGRRYHDQDECYNRREIEEVRDMVREGFDLLGAFNWSDYVPWIRFFYDPLRVRERCSVLAPRVKKFVKRILEEHRIMAPFKELSDDSDFVDVLLSLEEDDKLEDDDIIAVLWEMIFRGTDTAALLTEWVMAELILNEQMQTRLRNELRSVVGNKMVVTDADVIKLPYLEAIVKETLRLHPIGPLLSWARLSTSDVHLSNGMVVPANTTAMVNMWAITHDPSVWHEPLVFKPERFVKSEGGVEVDIRGGDLRLAPFGAGRRVCPGKNLGLVTVSLWVANLVHRFHWFQDMANPVDLAEVLKLSCEMKNPLRALASPRFTN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02856 499 Pfam Cytochrome P450 27 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 PANTHER CYTOCHROME P450 78A7-RELATED 3 496 - -
Vimu3g02856 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vimu3g02856 499 Gene3D Cytochrome P450 17 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02856 499 FunFam Cytochrome P450 78A5 18 496 - -
Vimu3g02856 499 SUPERFAMILY Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02856 Vimu-Chr3 42754059 42755931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02856 1 497 Cytochrome P450 AT5G09970 66.333 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02856 K20619 - qsa:O6P43_008036 713.375