Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02825 ATGGGAATTTCTTCACACCCTTCTCTTGTCTCCCTGATCTCTTTGAAGGATCTGCTTGAGGGAACTGAAGGAAACAGAAATTCATCATACGGGTGTTTGAGGACCAGGCCAACAAGGAGGGTTTTGATGAAGAGAAGGGGTGGTTGTAGAAGAGGATCAAATGGGATTCGGAGACGCGTGAGAACATTGAAGACCCTTGTACCTAACTCTGATTCTTTGGGGTTGGATGGACTCTTCAGAGAAACTGCTAATTACATATTGTCCTTACAAACGAGAGTGAGGGTCATGCAGGTTATGGTTAAGGTATTGACAGCCTCTCTCGACTGA 327 0.4526 MGISSHPSLVSLISLKDLLEGTEGNRNSSYGCLRTRPTRRVLMKRRGGCRRGSNGIRRRVRTLKTLVPNSDSLGLDGLFRETANYILSLQTRVRVMQVMVKVLTASLD 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02825 108 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 39 103 IPR044660 GO:0006355
Vimu3g02825 108 CDD bHLH_AtIBH1_like 45 100 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02825 23 106 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 47.872 8.07e-20 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02825 - - vum:124832498 169.474