Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02816 ATGGAGAGTATCAAGTTTGCATCTTTGGCCCTGTCTCCTTATCGACGCTCTGGGATGTCAGGGAACCGGTTGAATTCCCCTTTACTTACCATTGATTCTGCAGCACAGTTTTGGTATTGCAAGGTTGATCTTTCTGCTGCATCATCAAGTATTCCATTGCCAAATATCAGATTTTCTTGTAGATACTCACCAAGTGTAGCAACAGCAACATGGACCTCAAATCCTTCTACCAAACATTGGATATTGCACTCAACTGCGCAGATAGAAAGTATAATCACAAGTAATGAAGATCAAAGCATGTGGGAGGCATGTAAACAAGCTCTTTCTGCATTTAACTTCAGTGATGAAGAAAAGGACAAGATACTTGGGAAAGCATTTGGTTTTGTTCATTCCCCTTACTGGGGAGAAGAACGTACGATGGAAGTTCCAAAATTTGAGACAGTAAATGGAATACTAGACTATCTAAGGAGTTTAAATCTTTCTGATGATGATCTGTCTAAGTTGCTTAAAAAGTTTCCAGAAATTCTTGGATGTAATTTAGAGGAAGAGTTGAAAGGCAATGTAAAGATCCTAGAGGAGCAGTGGAGTATTAACGGAAATTCTCTTCGGAAACTTCTCCTTAGAAATCCAAAAGTGTTGGGTTATAATGTTGATTGCAAGGGAGACTGTATAGCACAATGCACTAGATGCTGGGCTCGTTTCTAG 705 0.3957 MESIKFASLALSPYRRSGMSGNRLNSPLLTIDSAAQFWYCKVDLSAASSSIPLPNIRFSCRYSPSVATATWTSNPSTKHWILHSTAQIESIITSNEDQSMWEACKQALSAFNFSDEEKDKILGKAFGFVHSPYWGEERTMEVPKFETVNGILDYLRSLNLSDDDLSKLLKKFPEILGCNLEEELKGNVKILEEQWSINGNSLRKLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02816 234 Pfam mTERF 152 216 IPR003690 GO:0003690|GO:0006355
Vimu3g02816 234 FunFam uncharacterized protein LOC106769908 84 230 - -
Vimu3g02816 234 Gene3D Transcription termination factor 3, mitochondrial 76 229 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vimu3g02816 mTERF 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02816 - - gmx:100797265 395.971