Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02803 ATGCTGCTATTGTTTCTGGGTTTTTATCTCGAGTCAGAAACCGGAAAACTCAATGCGTCGTCGTATTACACCGTGGTTGTGGATTGTGGAAGCACTGGAACACGGGTGAATGTGTATGAGTGGATGGTAGGCGTAAAAGGAGCAAGCAAAGGGAACTTGCCAGTGTTGCTGCACTCCTATCCTGATAATACAACCAAGAGGAGTTCACTTTGGAAAGGCTTTGGAGCCTTTGATTGCGTGGAGCAAGTGGTGCCGCGAGAAATGCGCGGCAGTACTCCTGCTTTTGTCTTGGCTACTGCTGATTTGAGGGGGCTCGCCTTGGAGGACGCTGATAGGGTATTGGGAGATATTGAGGCTGTTGTGAAAGGCCATAGCTTTATGATGAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAAGGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTACAAAATGGGCACCTTTGATGATAACTATCCCAAGTCTCCCACTTTGGGACTTGTTGATATTGGGGGCTCGTCGTTGGATTGTGGCAGAGATAGATGTTGCTGTTGA 558 0.4821 MLLLFLGFYLESETGKLNASSYYTVVVDCGSTGTRVNVYEWMVGVKGASKGNLPVLLHSYPDNTTKRSSLWKGFGAFDCVEQVVPREMRGSTPAFVLATADLRGLALEDADRVLGDIEAVVKGHSFMMSKSWIRVLSGKEEAYYGWVALNYKMGTFDDNYPKSPTLGLVDIGGSSLDCGRDRCCC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02803 185 Gene3D - 23 136 - -
Vimu3g02803 185 Pfam GDA1/CD39 (nucleoside phosphatase) family 18 176 IPR000407 GO:0016787
Vimu3g02803 185 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 176 IPR000407 GO:0016787
Vimu3g02803 185 Gene3D Exopolyphosphatase. Domain 2 137 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02803 Vimu-Chr3 42296361 42296995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02803 19 177 Nodulin-like Gene Family AT4G19180 33.516 1.13e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02803 - - vra:106753322 327.791