Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02802 ATGCTGCGTTTGCTTGCTAGTAATTCTGTTCTTACCAGTTCAACACGCACCACACAACACGGTGCCACTGAGACAGTTTATGGACTCTCACAAATTGGACAATACTATGCCCCTGATGCAACTAGAGGCTACTTCGCTTCTTCTGCATCCTTTCTCTCTTGTCCTGCACTCTCACCACTTTGGCCGAATTTCAAGGAAGCAGTGGTTGATGCAGACGTTGATTTGTTCAAGAAATTTCATGGGGTAACAAAGTACCAGTACATGGAAAAGGATCCAAAAATGAAACAAATGTTTAACAGGACTGTGGCAGATTTGTGTGCAACATATATGATTAGAGTACTTGAAATATATACTGGATTTGAGGGAATATCAAGGTTGGTTGATGTAGGAGGGGTTGATCATGTTGGAGGAGATATGTTTGCAAGAGTTCCAGAAGGTGACGCCATGACATTAAAGGTTGTCTTACACAATTGGACTGATGAGAAATGCGTAGAAATTTTGAGCAATTGTCACAAAGCACTGTCTCCAAATGGGAAGGTGGTTGTTCTGGAGATCATAATGCCAGAAGAACCAGAAGCAACTGAACAATCTAAGCTTTTTTCGTGCCTGGACAACCTTATGTTTATCACAGCAGGTGGAAAGGAAAGAACTTTGAAACAGTACGAGAATTTGTGCAAGCTCGCTGGTTTTTCAAAATTTCATATGTTGCTTGTGATGTCTCCTGGCCGGGAGTGA 735 0.419 MLRLLASNSVLTSSTRTTQHGATETVYGLSQIGQYYAPDATRGYFASSASFLSCPALSPLWPNFKEAVVDADVDLFKKFHGVTKYQYMEKDPKMKQMFNRTVADLCATYMIRVLEIYTGFEGISRLVDVGGVDHVGGDMFARVPEGDAMTLKVVLHNWTDEKCVEILSNCHKALSPNGKVVVLEIIMPEEPEATEQSKLFSCLDNLMFITAGGKERTLKQYENLCKLAGFSKFHMLLVMSPGRE 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02802 244 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 244 IPR016461 GO:0008168
Vimu3g02802 244 Gene3D Vaccinia Virus protein VP39 133 235 IPR029063 -
Vimu3g02802 244 Gene3D - 1 36 IPR036388 -
Vimu3g02802 244 Pfam O-methyltransferase domain 132 231 IPR001077 GO:0008171
Vimu3g02802 244 Pfam O-methyltransferase domain 61 131 IPR001077 GO:0008171
Vimu3g02802 244 Gene3D Vaccinia Virus protein VP39 38 132 IPR029063 -
Vimu3g02802 244 PANTHER O-METHYLTRANSFERASE 1 131 IPR016461 GO:0008168
Vimu3g02802 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 54 235 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02802 Vimu-Chr3 42293518 42294856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02802 1 230 Monolignol Biosynthesis Gene Families AT5G54160 33.835 1.30e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02802 - - gmx:100787536 345.125