Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02755 ATGGCGAAAGACGTTGAGGTTACCGAGCGTGGCTCCTTCTCTGGGAAGGACTACCATGACCCTCCTCCTGCACCCCTCATTGATGCTGAGGAGCTTACAAAGTGGTCCTTTTACAGGGCTCTCATTGCTGAGTTCATTGCAACTTTGCTTTTCCTCTACATTACCGTGCTCACAGTGATAGGGTACAAGCACCAGAGTGACATCAAGGCCGATGGTGATGTCTGTGGTGGGGTTGGCATTCTTGGCATTGCATGGGCCTTCGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGAATATCAGGTTCTTCTCTTGTCCTTTCCCCAGATCCTTTGGCTCCAAATGAAAAAAATTATGGATATATCCTGTCATTTGCCATGTTTGGTTCATGTTTTGCAAACTCTCATTATTTTTTTTACTTTTTCACACTTTTCTGTGTTGGCTGTCTGAAAAAAAAAATGTTTGCTTGCAGAGGGTTTCTTATTGTTTTGAATTTTTCGTTCTACGCTTCCAAGCATAGAAACTTGCTCTGTTTAAGCCCCGTTTATTCAGTCGTGTTATCCAAAATAAAAGGGATTTATTACTTGGTTTCCTTTGTTTTTCTCGTCGGCTCAAGTTTCCTAGACTCCGTAAAGGGGTTTCTGTTTTTGGACTGTGTTTTTTGTAGCAATTGTTTGTTCAGGATTACCATGAAAGGCTTAGTTCTCATTTTGTTGATTTGGTTTGCAGGGGGTCACATTAACCCAGCAGTAACATTTGGGCTGTTTTTGGCTCGCAAGGTGTCTTTGATCCGAGCTATCTTGTACATAGTGGCTCAGTGCTTGGGGGCTATCTCTGGAGTTGGGTTGGTGAAGGCCTTCCAAAAGTCTTACTACAACAAGTATGGTGGTGGGGCTAATTCCCTCGCTGATGGGTACAGCAAAGGTACTGGATTGGGTGCTGAGATCATTGGCACCTTTGTTTTGGTTTACACTGTCTTCTCTGCCACTGATCCCAAGAGGAATGCCAGAGATTCCCATGTGCCGGTACCTTCTCAATCATTTTTCTTATTATTAGTTTCTGTTTCTGATCTTGTGGCCTTGTTTTAA 1092 0.435 MAKDVEVTERGSFSGKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYITVLTVIGYKHQSDIKADGDVCGGVGILGIAWAFGGMIFILVYCTAGISGSSLVLSPDPLAPNEKNYGYILSFAMFGSCFANSHYFFYFFTLFCVGCLKKKMFACRGFLIVLNFSFYASKHRNLLCLSPVYSVVLSKIKGIYYLVSFVFLVGSSFLDSVKGFLFLDCVFCSNCLFRITMKGLVLILLIWFAGGHINPAVTFGLFLARKVSLIRAILYIVAQCLGAISGVGLVKAFQKSYYNKYGGGANSLADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVPSQSFFLLLVSVSDLVALF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02755 363 ProSitePatterns MIP family signature. 247 255 IPR022357 -
Vimu3g02755 363 SUPERFAMILY Aquaporin-like 226 344 IPR023271 -
Vimu3g02755 363 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu3g02755 363 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu3g02755 363 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 244 345 IPR034294 -
Vimu3g02755 363 Gene3D Glycerol uptake facilitator protein. 24 106 IPR023271 -
Vimu3g02755 363 Gene3D Glycerol uptake facilitator protein. 199 362 IPR023271 -
Vimu3g02755 363 Pfam Major intrinsic protein 31 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu3g02755 363 Pfam Major intrinsic protein 243 344 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vimu3g02755 363 SUPERFAMILY Aquaporin-like 31 105 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02755 Vimu-Chr3 41922589 41923680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02755 234 344 Major Intrinsic Protein MIP AT2G37170 82.456 6.37e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02755 K09872 - gmx:100817292 199.134