Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02753 ATGGTTAACCGGAGCTCGGATGACAATACCACATCCAGAAGAATATGTAGAGCAAGTCAAGTAGCTGATTTGTTCCCAACTGTGTCTCCAGAAATTATTGTGCGTGAGGCCAGGTTGGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCACTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGTTGGCAGGATTTACATTACCAAACGGTTGCAAGAGAACCTGTTTGGTTGCTGTTATTGGCAACTCACTTAGTGAAACTTTCTTGTTTGGAAGTGATGATTTCAAGGTTGGTGGTTTTGATGGGAAATTCAGCCTCAACAAGGGGTATGTGGCTGGTATATTAACAGTAGATACTGTTGCTGACTTTCTACCTAGGAAGGGGCCCTTGCGGCAGAAAAGGCGGAAGGGAATAGCTAAACTCTTGGTAGCAAAGGCAGAATCACAAGCTAGAAGCTGGGGCTGTCGTGCAATTGCATTACACTGTGATTTCAAAAATCCTGCTGCCACAAAGTTATATCAAGGCCAAGGTTTCAGATCTATCAAGGTTCCAGAAGGAGCTAACTGGCCACAGCCAAAGACCTCACCAGATATAAAGTTCAACTTCATGATGAAGCTTCTCAATAACTAA 666 0.4474 MVNRSSDDNTTSRRICRASQVADLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFTLPNGCKRTCLVAVIGNSLSETFLFGSDDFKVGGFDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQKRRKGIAKLLVAKAESQARSWGCRAIALHCDFKNPAATKLYQGQGFRSIKVPEGANWPQPKTSPDIKFNFMMKLLNN 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02753 221 CDD NAT_SF 146 173 - -
Vimu3g02753 221 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 146 221 IPR000182 GO:0016747
Vimu3g02753 221 Gene3D - 27 201 - -
Vimu3g02753 221 Pfam Acetyltransferase (GNAT) family 142 190 IPR000182 GO:0016747
Vimu3g02753 221 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 32 201 IPR016181 -
Vimu3g02753 221 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 10 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02753 Vimu-Chr3 41877145 41878790 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu3g02753 Acetyltransf_1 2e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02753 - - vum:124848387 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02753 3 41877145 41878790 Vimu3g02753 3 41877145 41878790 ECH
Vimu8g00082 8 3743522 3744064 Vimu3g02753 3 41877145 41878790 PCT