Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02743 ATGGAATATTCGAAGGAAAAGTGTGAGAATGGAAATGGTTACAGTAACAGTGACCCGCTTAACTGGGGCATGGCTGCCGATGCTTTGAGAATTAGCCACCTTGAGGAGGTGAAGCGCATGGTGGAGGAATACCGTAACCCCGTGGTGACGGTAGGTGGCGGCGGTTGCTATCGGCGGAGGAAGCCCGGCATTCTTTCTTTATTTCTACCCATAATGGAACATATATTGGATGGAAGTTCATTTATTAAGGAAGCACAAAAGTTTAATGAAATTGACCCACTTCAAAAGCTTAAACAAGATAGGTATGCTATCAGAACATCACCTCAAAAACTCTCACAATTGACATTAACCATGACGACTTGCTTAAAATTGTTGATGGACAACCTACCCTCTGATGCAAAAGTTGAGGTTAGTCCTAATTGA 423 0.4303 MEYSKEKCENGNGYSNSDPLNWGMAADALRISHLEEVKRMVEEYRNPVVTVGGGGCYRRRKPGILSLFLPIMEHILDGSSFIKEAQKFNEIDPLQKLKQDRYAIRTSPQKLSQLTLTMTTCLKLLMDNLPSDAKVEVSPN 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02743 140 Gene3D Fumarase/aspartase (Central domain) 71 112 - -
Vimu3g02743 140 Gene3D - 9 56 IPR024083 -
Vimu3g02743 140 SUPERFAMILY L-aspartase-like 71 111 IPR008948 GO:0003824
Vimu3g02743 140 PANTHER HISTIDINE AMMONIA-LYASE 71 118 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02743 Vimu-Chr3 41745685 41748375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02743 6 53 Monolignol Biosynthesis Gene Families AT3G10340 52.000 6.37e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02743 K10775 - gmx:100801470 77.7962