Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02741 ATGATAAAGATGAAGATTGAGACCAAACATCTCAAGTGCTGCATAAGGGAATTTTCTAAATTCGGAAAGGTGAGAGTTAAGTTTCCGCTGGAGCACATGCGAATGTTACTTTCGTGTTGTACCAAGTCACACTCGTACGTGCCCAAAGATGTTCCAAAAGGTCACCTAGTTGTCTACGTTGGTGAGGATTGCAAGAGATTTGTGATCAAAGTAGGTATACTCAGCCATCCATTGTTCCAAGTCTTGCTGGACCATGCAGAGGACGTTTTTGGATTCGACAATGCTTCCAAACTTCATATCCCTTGCAACGAGAACATTTTTCTTCACCTTCTTCATATTGCTCAGGATCAAACGCTCTCCCGTTGCTTCTAG 372 0.4274 MIKMKIETKHLKCCIREFSKFGKVRVKFPLEHMRMLLSCCTKSHSYVPKDVPKGHLVVYVGEDCKRFVIKVGILSHPLFQVLLDHAEDVFGFDNASKLHIPCNENIFLHLLHIAQDQTLSRCF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02741 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 110 IPR003676 GO:0009733
Vimu3g02741 123 Pfam Auxin responsive protein 42 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02741 Vimu-Chr3 41724715 41725086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02741 48 111 Calmodulin-binding Proteins AT3G43120 53.125 4.42e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02741 K14488 - adu:107467907 124.405