Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02732 ATGAGTCTAGAGGAGTTGATACCATCAAACCAGGCCAAATCTTTTCTATATTGCTTCTTCATCAGAACAGGGTTGGTACTTTCCACCCTCGTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTGGTTATGTCATTGATTGGATCATTATTCACAATGCTTGTTTCTTTGATACTACCCTGCGTTTGTTTCCTGAAAATCTTGCGAGGCAAAGTGACACGATTGCAGGCAGCACTTTGCGTTACAATCATCATGGTAGGAGTTGTCTGTTCTTCTTTTGGAACATACTCTGCCCTCTCCGAGATTATTAAGAGTTTGAGGGGATGA 324 0.4167 MSLEELIPSNQAKSFLYCFFIRTGLVLSTLVIGLSVPFFGLVMSLIGSLFTMLVSLILPCVCFLKILRGKVTRLQAALCVTIIMVGVVCSSFGTYSALSEIIKSLRG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02732 107 Pfam Transmembrane amino acid transporter protein 10 96 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02732 Vimu-Chr3 41652250 41653320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02732 1 105 Amino Acid or Auxin Permease AAAP Family AT5G02180 52.381 1.43e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02732 K15015 - gmx:100775840 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02732 3 41652250 41653320 Vimu3g02732 3 41652250 41653320 ECH