Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02731 ATGGGGACCCATGCCAGCATGACAACATGGCAATTGGCTATCTATTATCTCCCATTAATGTACGGCTACGATTTCTATGTCCCTGCACTGTCGAAGACACAGAAGATGAATAATTCTGTCTCAGAGAACAGTTTTATCATCGAGAGTGATGAAGAGGATGTGGAGAAGGATTTGAACAAAGGTGGAGGTGATGGTAACGATTCTGATTCTTCTAGTTACTCAACTGAAAACCCTCCACAGCGAAAGCCCAGTTCTTACAACATCTCGTGGCCACAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACACCCTCATTGTCAAGACTAAGCAGTTCTTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAGCACTTCCTTCAGTGACAAAGCCTCTTTTACAAGAACCAGAAGATGAGCAGCATCAGAGACGTAGCTCTCACACCTTGCTTCCTCCTCTTTCTTCTAGAAGATCTTCTTTGATTAAGAAGGACTCCAAGGTTTCTCATGAAGTTCCCTCTCGAAACTGCTCTTTTGGACAAGCTGTGTTCAATGGCATAAATATTCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGTGATCCTGAGCTTGAAACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCAATTTCAGCTTGTTGCATTGAATACATAATTTTGGAGGGCGACAACTTGTCTTCCTTGTTTCCAAATGCAAGCTTCAATTTGGGTGCAATTGAACTGGATTCACATACACTTTTTGCTGTGCTTACTGCCTTGACTGTTCTTCCTACTGTTTGGCTCCGTGATCTAAGAATTCTCAGTTACATATCCGCTGGTGGAGTTGTTGCATCCATTTTGGTGGTTCTCTGCTTGTTATGGGTTGGAGTAGACAACGTAGGATTTCATAGCAAAGGGACCACACTCAATCTTGCAACTTTTCCTGTTGCTGTGGGTCTCTATGGTTACTGCTACTCTGGACATGCTGTTTTCCCGAACATTTATTCATCCATGGCAAATAAAAACCAATTCCCTGGAGTGCTCTTAGCATGTTTTGGTATTTGTAGCTTATTGTATGCTGGAGCTGCTGCTATGGGATACACAATGTTTGGTGAAGCTATACTCTCCCAATTCACTCTCAACATGCCTCAAGAATTGGTAGCAACCAAGATTGCTGTTTGGACCACGGTGGTTAATCCACTTACCAAATATCCTTTTTTATAG 1299 0.4273 MGTHASMTTWQLAIYYLPLMYGYDFYVPALSKTQKMNNSVSENSFIIESDEEDVEKDLNKGGGDGNDSDSSSYSTENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPEALPSVTKPLLQEPEDEQHQRRSSHTLLPPLSSRRSSLIKKDSKVSHEVPSRNCSFGQAVFNGINILCGVGILSTPYAAKEGGCDPELETYPDIGQAAFGTTGRIAISACCIEYIILEGDNLSSLFPNASFNLGAIELDSHTLFAVLTALTVLPTVWLRDLRILSYISAGGVVASILVVLCLLWVGVDNVGFHSKGTTLNLATFPVAVGLYGYCYSGHAVFPNIYSSMANKNQFPGVLLACFGICSLLYAGAAAMGYTMFGEAILSQFTLNMPQELVATKIAVWTTVVNPLTKYPFL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02731 432 MobiDBLite consensus disorder prediction 46 88 - -
Vimu3g02731 432 MobiDBLite consensus disorder prediction 64 88 - -
Vimu3g02731 432 PANTHER AMINO ACID TRANSPORTER 180 218 - -
Vimu3g02731 432 MobiDBLite consensus disorder prediction 131 165 - -
Vimu3g02731 432 Pfam Transmembrane amino acid transporter protein 221 431 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02731 Vimu-Chr3 41646756 41651865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02731 36 429 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.991 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02731 K15015 - gmx:100775840 630.943