Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02731 ATGGGGACCCATGCCAGCATGACAACATGGCAATTGGCTATCTATTATCTCCCATTAATGTACGGCTACGATTTCTATGTCCCTGCACTGTCGAAGACACAGAAGATGAATAATTCTGTCTCAGAGAACAGTTTTATCATCGAGAGTGATGAAGAGGATGTGGAGAAGGATTTGAACAAAGGTGGAGGTGATGGTAACGATTCTGATTCTTCTAGTTACTCAACTGAAAACCCTCCACAGCGAAAGCCCAGTTCTTACAACATCTCGTGGCCACAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACACCCTCATTGTCAAGACTAAGCAGTTCTTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAGCACTTCCTTCAGTGACAAAGCCTCTTTTACAAGAACCAGAAGATGAGCAGCATCAGAGACGTAGCTCTCACACCTTGCTTCCTCCTCTTTCTTCTAGAAGATCTTCTTTGATTAAGAAGGACTCCAAGGTTTCTCATGAAGTTCCCTCTCGAAACTGCTCTTTTGGACAAGCTGTGTTCAATGGCATAAATATTCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGTGATCCTGAGCTTGAAACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCAATTTCAGCTTGTTGCATTGAATACATAATTTTGGAGGGCGACAACTTGTCTTCCTTGTTTCCAAATGCAAGCTTCAATTTGGGTGCAATTGAACTGGATTCACATACACTTTTTGCTGTGCTTACTGCCTTGACTGTTCTTCCTACTGTTTGGCTCCGTGATCTAAGAATTCTCAGTTACATATCCGCTGGTGGAGTTGTTGCATCCATTTTGGTGGTTCTCTGCTTGTTATGGGTTGGAGTAGACAACGTAGGATTTCATAGCAAAGGGACCACACTCAATCTTGCAACTTTTCCTGTTGCTGTGGGTCTCTATGGTTACTGCTACTCTGGACATGCTGTTTTCCCGAACATTTATTCATCCATGGCAAATAAAAACCAATTCCCTGGAGTGCTCTTAGCATGTTTTGGTATTTGTAGCTTATTGTATGCTGGAGCTGCTGCTATGGGATACACAATGTTTGGTGAAGCTATACTCTCCCAATTCACTCTCAACATGCCTCAAGAATTGGTAGCAACCAAGATTGCTGTTTGGACCACGGTGGTTAATCCACTTACCAAATATCCTTTTTTATAG 1299 0.4273 MGTHASMTTWQLAIYYLPLMYGYDFYVPALSKTQKMNNSVSENSFIIESDEEDVEKDLNKGGGDGNDSDSSSYSTENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPEALPSVTKPLLQEPEDEQHQRRSSHTLLPPLSSRRSSLIKKDSKVSHEVPSRNCSFGQAVFNGINILCGVGILSTPYAAKEGGCDPELETYPDIGQAAFGTTGRIAISACCIEYIILEGDNLSSLFPNASFNLGAIELDSHTLFAVLTALTVLPTVWLRDLRILSYISAGGVVASILVVLCLLWVGVDNVGFHSKGTTLNLATFPVAVGLYGYCYSGHAVFPNIYSSMANKNQFPGVLLACFGICSLLYAGAAAMGYTMFGEAILSQFTLNMPQELVATKIAVWTTVVNPLTKYPFL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02731 432 MobiDBLite consensus disorder prediction 46 88 - -
Vimu3g02731 432 MobiDBLite consensus disorder prediction 64 88 - -
Vimu3g02731 432 PANTHER AMINO ACID TRANSPORTER 180 218 - -
Vimu3g02731 432 MobiDBLite consensus disorder prediction 131 165 - -
Vimu3g02731 432 Pfam Transmembrane amino acid transporter protein 221 431 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02731 Vimu-Chr3 41646756 41651865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02731 36 429 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.991 0.0 545