Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02674 ATGTTGCACTTAATCTCATCTGATTTCAAGATTCTCATAGATTTTCTGGTTCAAATCGCTATAAAGAAGTTGGGTTGGCTCGACGTCGGCAACAACACCTGTCCCGCAACCATCCAGATCTGGTCCAATTCCCTTCGCCATTCAACTATCCTCTCCCCTGACCAGAGACTAACTCCGAATCTGTCACCTGATTCTTGTTCAGGTGGTGGTGTTGCTGCCATTTCACCGAAATCTGAATCAAAAAGAAGATCCCCTGGAGTCATCGCCAGATTGATGGGTCTTGATGAACTGCCATTTCAGCAGCCTATTAATAAGCAGCATAAGGGTTTGTCTGAAAACCACAAGAAGACTCCACAATTGCAGAAAATTGCACTTGCATTTAGGCGCAAGGGAGAGATAGAAGAGGCTGTTGAAATTTTAAGGCAGGCCAAAACTTTGGAAGCTAATTCATCTCAAGCTGGGTCCGCTATTCACTTGGACTCTTCAAAGAATTTCAGTAGTGGTGGGCAGCGCGACGGGCCTTTGAGTAGGCGGATGACGTTTGAAAGGTCCTCAGTGACAGGAAATGACATGTTCACGTTAGAAGAGGATGTTCTGAAAGGGATGAACGGGGAGGCACGCACGTCGACGCAGAAGGAGGGTGCATCCATCTATCGTCGTCGTCAAACTCTAACCCAAACCCTATCTAGCTTCGCTTTTGCCCCTTCTCATTCACTCTGCCCCAATTCCAAAATTCCCAACCCTAACCCTAAAACCGAATCTTCTGATGAAACTCGACACGCCATACTCCACGGTTTCAGAATCAGTTTCTCCATGGAGGGCTCTGCAGAGGATCTCGGAGCCCCCGAGTCATGGGAGGTCGCCGATTTGGACGAGTCCATGAACCGCTTGAACCTCATGCTCTCTTCCAGCAAGGATTCCAACCATCCTGACCAACGTCTCTCCGATGATGACGTTCCGCCGCCGCCACCGCCTCCTCCGCTCCCTTCGTCCAGTGGCGACATGGTTTCCGATGACGTCGTCAATCAGGTCGACCAGTTCCTTCGCGAAGCCATTCAGAACCCTCGCGAACGACTCTCAAAGAAACAATTCCGGCACAGTTTCTGCATTTTCAAGTGTAGCCACCATATGAAAGGATTTGGGTTTTTGAAGTGA 1155 0.4909 MLHLISSDFKILIDFLVQIAIKKLGWLDVGNNTCPATIQIWSNSLRHSTILSPDQRLTPNLSPDSCSGGGVAAISPKSESKRRSPGVIARLMGLDELPFQQPINKQHKGLSENHKKTPQLQKIALAFRRKGEIEEAVEILRQAKTLEANSSQAGSAIHLDSSKNFSSGGQRDGPLSRRMTFERSSVTGNDMFTLEEDVLKGMNGEARTSTQKEGASIYRRRQTLTQTLSSFAFAPSHSLCPNSKIPNPNPKTESSDETRHAILHGFRISFSMEGSAEDLGAPESWEVADLDESMNRLNLMLSSSKDSNHPDQRLSDDDVPPPPPPPPLPSSSGDMVSDDVVNQVDQFLREAIQNPRERLSKKQFRHSFCIFKCSHHMKGFGFLK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02674 384 MobiDBLite consensus disorder prediction 302 337 - -
Vimu3g02674 384 MobiDBLite consensus disorder prediction 317 331 - -
Vimu3g02674 384 MobiDBLite consensus disorder prediction 61 84 - -
Vimu3g02674 384 MobiDBLite consensus disorder prediction 237 252 - -
Vimu3g02674 384 Pfam DUF761-associated sequence motif 79 98 IPR032795 -
Vimu3g02674 384 MobiDBLite consensus disorder prediction 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02674 Vimu-Chr3 40940697 40947590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02674 74 149 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 40.506 2.29e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02674 - - gmx:100791122 129.798