Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02642 TTTCCAAATATCTTACACTTCTTTTTTTCCTTCTATTTGACCACAGATATGGACACTGTAGCCACTACTACACTGATCTTCATGTTGGCATGTGCAATCATGCATGGTCTTCGTTCACTGCATGCAAGGAGCAGAAAATCGAACTACAGGCTTCCACCAGGACCCTCCCTTCTCACCATCATCAGAAACTCTCGTCAACTCTACAAGAAGCCACAGCAGACAATGGCCAAGCTTGCCAAATTCTATGGCCCCATAATGCGTTTCACCATCGGCCAATCAACCACCATAGTAATCTCTTCCACAATCGCAGCCCAAGAGATTCTCCAAACCCATGACACCCTATTCTCTGACAGAACAAACCCCGACATCACAACATCGTACAACCACAACCATTACAGCTTGGTCTTTCTCCCTGTCTCACCCCTCTGGCAAGAACTGAGAAAAATTTGCCACGGAAACTTGTTTTCCGTCAAAACCCTTGACGCAAGCCAAGACCTTAGACGCAGGAAACTGCAGGAACTGCTTAGTGATATCCGCCAAAAAAGCCATGACGGCGAAGTGGTGGATGTCGGGAGAGCAGCATTCATGGCCTGCATTAACTTTTTGTCGTACACTTTTGTGTCAAAAGATTTTGTTCCCTCTGTAGGTAATGGTGAGTACAAGCACGTTGTGGGGACTCTCTTGAAAGCAACGGGAACACCCAACTTGGTGGATTACTTCCCATTCTTGAGGGTGTTCGATCCACAAGGCATAAGAAGACACACCACCAATTACATAGACAAGTTGTTCGATGTGTTGGACCCCATAATCGATGAACGGATGAAGATGAGGCAAGAAGAGAATTATGTCACCAGCCATGACATGCTTGATATCTTGCTTGATATTTCTCAAAAGAGCAGCGAGAATATACACAGAAAGCAGATCAAACATTTATTCCTTGATCTACTGGTTGCGGGGACCGATACGACGGCGTACGGCTTAGAACGGACAATGACGGAGCTAATGCACAACCCGGAGGCGATGCGGAAGGTGAAGAAGGAGTTGGCAGAGGTGATCGGAGTGGGGAAGGCGGTGGATGAATCGGACGTGGCAAGGCTTCCGTATATGCAAGCGGTGATAAAAGAGAGTCTTCGCATGCACCCACCAGCGCCGCTTCTGCTTCCGCGAAGGGCAAAAATAGACGTGGAAGTGTGCGGGTGGACGGTGCCAAAGGGTGCTCAGGTGCTGATAAACGAGTGGGCCATAGGGAGGAGCCCGGAGGTGTGGGAGGATGCACATGTGTTCTCGCCGGAAAGATTCTTGGACTCTGACATCGACGTGAAAGGTCGACACTTTAAGCTGACACCCTTCGGCAGTGGAAGACGCATCTGCCCTGGCTCTCCACTCGCCGTCAGAATGTTGCACCTCATGCTGGGCTCTCTTGTCAACTCCTTCGACTGGAAACTCGAAAACAACATGGAACCTAAGGATATGGACATGGATGAATCGCTTAGGGCAATTCCTGTTCCTCTGTAG 1515 0.4891 FPNILHFFFSFYLTTDMDTVATTTLIFMLACAIMHGLRSLHARSRKSNYRLPPGPSLLTIIRNSRQLYKKPQQTMAKLAKFYGPIMRFTIGQSTTIVISSTIAAQEILQTHDTLFSDRTNPDITTSYNHNHYSLVFLPVSPLWQELRKICHGNLFSVKTLDASQDLRRRKLQELLSDIRQKSHDGEVVDVGRAAFMACINFLSYTFVSKDFVPSVGNGEYKHVVGTLLKATGTPNLVDYFPFLRVFDPQGIRRHTTNYIDKLFDVLDPIIDERMKMRQEENYVTSHDMLDILLDISQKSSENIHRKQIKHLFLDLLVAGTDTTAYGLERTMTELMHNPEAMRKVKKELAEVIGVGKAVDESDVARLPYMQAVIKESLRMHPPAPLLLPRRAKIDVEVCGWTVPKGAQVLINEWAIGRSPEVWEDAHVFSPERFLDSDIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLVNSFDWKLENNMEPKDMDMDESLRAIPVPL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02642 504 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 FunFam Cytochrome P450 76C4 43 502 - -
Vimu3g02642 504 Gene3D Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 Pfam Cytochrome P450 52 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 SUPERFAMILY Cytochrome P450 45 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g02642 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Vimu3g02642 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 25 496 - -
Vimu3g02642 504 CDD CYP76-like 79 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02642 Vimu-Chr3 40621932 40623668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02642 17 502 Cytochrome P450 AT2G45550 43.478 3.00e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02642 - - vra:106780577 862.062