Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02580 ATGGGAATTGCAGTGGCAGGTGTTGATGTGTTGAGTGAAAAAGCGGCGATGATGAGAGAGTCTCTGCAGAAGAGTCAAACCATCGCAGACAACGTCGTTACCATTCTAGGCTCCTTCGACCACCGTCTCTCGGCACTTGAAACTGCCATGCGTCCAACTCAGGTACCCTTTTTCATGTTCTCCATTAAATGGGGGAGATTTTGGGAACGGTTTGCTTTGTTTGACTTCAAAATGGGGTTTTGGGAAATGGGTTTTGGTTGGGCTAACTTTTCTTTGACACGAGTGCAATGGGGGTTCGTTTTTGGGGGTTCTTTATTTTTCAAAATGGGATCTGGAGGGTGGTTGAAAGTTGAATCTTTTCATCTGGGTTTGCAGATTAGAACTCATTCCATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCAGAGGTTATATTGGCTCACTTTGATCAATATCGTCAGGCTGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTCAAGCAATTGAAAACTTGAGAAGCAACATTCAGTTTTTTGGCAGTAAGAAGGGTTTTAAGAGCACTGATGGCATTGTTGTTCATGCTAATAATTTGTTAGCTAAGGCTATTTCAAAGCTAGAAGATGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCAGGGTCACCTCACCATGAGGGTGATCCCAGTGGCAAGATACCTTCTAATCATCATTCTGAGTCTCACAACAATAATGCCGATGCTGTTGTATATACCCCTCCCGCTCTTATACCACCAAGATTTTTGCCACTGCTACACGATTTAGCTCAGCAAATGGTTGAAGCTGGTCACCAACAACAGTTACTCAAAATATACAGACTAGAAATTACTGTCATGTGGTGCCATAAGGACATCATTCCTAGGGATGCCCGTTCTAATGTATTGGAAGAGAGCCTTCAAAAACTTGGAGTTGAAAAACTCAACAAAGATGATGTTCAAAAGCTGCAATGGGAGATCTTGGAAGCTAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGCGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTTGCTGAGGTGACGAAAAACAGTGTTTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTCTGGACATGTATGAAATAATGCAAGAGCTTCATTCTGAGATTGAAACTCTTTTTAAAGGCGAAGCTTGCTCTGGAATAAGAGAAGCTGCAACTGGTTTGACAAAACGTCTTGCACAAACAGCCCAAGAAACCTTCGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACCAAGACTGCTGTAACAGATGGAACTGTCCATCCTCTTACAAGCTATGTTATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAGGGGGTAATGATTCTTCACAGCTAGCATCTGTAACAGTGCGAATAATGCAAGCTTTGCAAACTAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGGATTGACACATCTTTTTCTCATGAACAATATTCATTACATTGTCAGATCGATTCTTCAGTGCCTTTCTATTCAGGGCCTTACCTCCTCAGGTGGTGGAAGTGGTACTGCTGGTGGTGATGGTGCAACTGGAAGCAGCAGTGGTGCTTCAAGAGCAATTGTTAAAGACCGGTTTAAGGCATTCAATGTTATGTTTGAGGAACTTCATCAGAAACAATCTCAATGGACAGTTCCTGACACCGAGTTGCGAGAGTCTCTCAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCCTTTGTCAAACGATTTGGGCCACTAGTGGAGAGTGGAAAGAATCCTCAGAAGTACATCAAATACACTGCAGAAGATTTAGACCGAATGCTGGGTGAATTTTTTGAAGGAAAAAACATGAGTGAAACTAAACGATAA 2112 0.4152 MGIAVAGVDVLSEKAAMMRESLQKSQTIADNVVTILGSFDHRLSALETAMRPTQVPFFMFSIKWGRFWERFALFDFKMGFWEMGFGWANFSLTRVQWGFVFGGSLFFKMGSGGWLKVESFHLGLQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLQAIENLRSNIQFFGSKKGFKSTDGIVVHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSGSPHHEGDPSGKIPSNHHSESHNNNADAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQQLLKIYRLEITVMWCHKDIIPRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTKNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGEACSGIREAATGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGNDSSQLASVTVRIMQALQTNLDGKSKQYKDLGLTHLFLMNNIHYIVRSILQCLSIQGLTSSGGGSGTAGGDGATGSSSGASRAIVKDRFKAFNVMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYTAEDLDRMLGEFFEGKNMSETKR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02580 703 Pfam Exo70 exocyst complex subunit 365 586 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu3g02580 703 SUPERFAMILY Cullin repeat-like 148 694 IPR016159 -
Vimu3g02580 703 Gene3D Exocyst complex component Exo70 257 703 - -
Vimu3g02580 703 Gene3D Exocyst complex component Exo70 146 250 - -
Vimu3g02580 703 PANTHER EXOCYST COMPLEX PROTEIN EXO70 576 695 IPR004140 GO:0000145|GO:0006887
Vimu3g02580 703 MobiDBLite consensus disorder prediction 236 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02580 Vimu-Chr3 40034425 40042118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02580 125 703 EXO70 exocyst subunit family AT5G03540 67.757 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02580 K07195 - gmx:100813987 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02580 3 40034425 40042118 Vimu3g02580 3 40034425 40042118 ECH