Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02544 ATGGGAGAGGTGAAGCTACATGGGTTTTGGTACAGTCCGTTCGCATTGAGGGTGAAGTGGAGCTTAAAGCTGAAAGGTATTGAATATGAGAACATTGAAGAGGATCGATTCAACAAAACTCCTGAACTCCTTCAGTACAATCCTGTCTACAAGAGAATCCCCGTTCTGGTTCATGCTGGAAAACCCATTTCTGAATCCATGATCATAATCGAATACATCGATCAGGTTTGGCCTCAACATCCACTCTTACCTTCTCATCCCTACGACAGAGCTCTCGCACGCTTTTGGGTCAAATACTCTGATGATCTGACCGAGGGAGTAAGAGCACTGTATCGTAGCAAAAATGTGGAAGATAGGAAGAAGGTGATAGAGGATATTATTTGGGAGCATTTTAGAGTTGTGGAAGATCAGTGTTTTGGTAAGGAAAACAAATTCTTTGGAGGAGAGAGTGTTAATGTTGTGGACTTGGCTTTTGGGTCCATCATCAAATATATTACTGTGTTGGAAGATATCTTTGAAGAGCAAATTCTTGAAGCACAGAAATTCCCTCGTTTGTATTCATGGTTTAATATCTTCAAATCTGAACCAATCATGGCAGAAATCTTACCTGACCAGGATCATATGGGGAAAATGGGAGAGGTGAGGCTTCATGGATTTTGGTACAGTCCCTTTACTTTAAGGGTGGTATGGACCTTGAAGTTAAAGGATATACCATATGAGAATATAGAGGAAGATCGGTACAACAAGAGTGTTAAACTTCTTGAATACAACCCAGTGCACAAGAAAACTCCAGTGCTAGTTCATAATGAAAAACCTTTATGTGAGTCTATGATTATTGTTGAATACATAGATCAGATTTGGCCACACAACCCATTGCTTCCTTCTCATCCCTACAACAGAGCTTTGGCACGCTTTTGGGTTAATTATACTGAAGAAATGTTTTCTGCAGGTGTGAAATTCTTCCGTAGCAATACTGATGAAGAACGAGAAAAGAGCATAGAGAATCTATGGAAGCATTTCATGGTTGTTGAGAATCAGTGTTTTGGTGATGAGAAGAAAATATTTGGGGGAGAAATTATTAACATTGTGGACATAGCTTTTGGGTCCATGTTCAAATTTTTTGAGGTTGCAGAAGATCTTATTGGAGCGAAGGTCCTTCAAGATGAGAAATTCCCTCAGCTGTGTTCCTGGTATAACAATTTCAAGAATGTTCCTGTTATTAAAGAAAATCTCCCAGACCACCAGAAAATGGTAGCTTTTATTAAGATTATTAGAGAAAAAAACTTGGCATCTTCCTAA 1299 0.3918 MGEVKLHGFWYSPFALRVKWSLKLKGIEYENIEEDRFNKTPELLQYNPVYKRIPVLVHAGKPISESMIIIEYIDQVWPQHPLLPSHPYDRALARFWVKYSDDLTEGVRALYRSKNVEDRKKVIEDIIWEHFRVVEDQCFGKENKFFGGESVNVVDLAFGSIIKYITVLEDIFEEQILEAQKFPRLYSWFNIFKSEPIMAEILPDQDHMGKMGEVRLHGFWYSPFTLRVVWTLKLKDIPYENIEEDRYNKSVKLLEYNPVHKKTPVLVHNEKPLCESMIIVEYIDQIWPHNPLLPSHPYNRALARFWVNYTEEMFSAGVKFFRSNTDEEREKSIENLWKHFMVVENQCFGDEKKIFGGEIINIVDIAFGSMFKFFEVAEDLIGAKVLQDEKFPQLCSWYNNFKNVPVIKENLPDHQKMVAFIKIIREKNLASS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02544 432 SFLD Main (cytGST) 210 430 - -
Vimu3g02544 432 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 224 IPR010987 -
Vimu3g02544 432 CDD GST_C_Tau 87 208 IPR045074 GO:0004364|GO:0006749
Vimu3g02544 432 Gene3D - 83 213 - -
Vimu3g02544 432 Gene3D - 293 432 - -
Vimu3g02544 432 SUPERFAMILY Thioredoxin-like 214 313 IPR036249 -
Vimu3g02544 432 CDD GST_N_Tau 4 77 - -
Vimu3g02544 432 Gene3D Glutaredoxin 214 292 - -
Vimu3g02544 432 Gene3D Glutaredoxin 1 82 - -
Vimu3g02544 432 SFLD Glutathione Transferase (cytosolic) 1 208 IPR040079 -
Vimu3g02544 432 FunFam Tau class glutathione S-transferase 1 85 - -
Vimu3g02544 432 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vimu3g02544 432 Pfam Glutathione S-transferase, C-terminal domain 107 199 IPR004046 -
Vimu3g02544 432 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 217 418 IPR045073 -
Vimu3g02544 432 Pfam Glutathione S-transferase, N-terminal domain 214 285 IPR004045 -
Vimu3g02544 432 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vimu3g02544 432 SUPERFAMILY GST C-terminal domain-like 75 210 IPR036282 -
Vimu3g02544 432 SFLD Main.3: Omega- and Tau-like 210 430 IPR045073 -
Vimu3g02544 432 SFLD Main.3: Omega- and Tau-like 1 208 IPR045073 -
Vimu3g02544 432 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 212 291 IPR004045 -
Vimu3g02544 432 FunFam Glutathione S-transferase GSTU6 209 294 - -
Vimu3g02544 432 FunFam Tau class glutathione S-transferase 293 431 - -
Vimu3g02544 432 CDD GST_C_Tau 297 424 IPR045074 GO:0004364|GO:0006749
Vimu3g02544 432 SUPERFAMILY GST C-terminal domain-like 286 427 IPR036282 -
Vimu3g02544 432 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 296 420 IPR010987 -
Vimu3g02544 432 CDD GST_N_Tau 214 287 - -
Vimu3g02544 432 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02544 Vimu-Chr3 39797749 39803931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02544 214 416 Glutathione S-transferase Gene Family AT2G29470 43.961 2.78e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02544 K00799 - gmx:547584 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02544 3 39797749 39803931 Vimu3g02544 3 39797749 39803931 ECH