Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02473 ATGAGTCCTCATGTCTATGTAACATATCGCCATATTGTGGCCACGGTTGTGATGTTCCCTTTTGCATACTTTCTGGAGAGAGATGCGAGACCAAAGCTGACATTTGCTCTTCTCATGGAAATTTTTTTGCTTTCTCTGTTAGGGGTTAGCGTAACCCTTAACATGTACTTTGCAAGCCTTAACTACACAAATCCGACCTTTGTTGCTTCCATGGTCAACACCATAGCTTCCCTTACCTTCATTATTGCTGTAGTAATCAGGTTTGAGGTTGTTGATGTTTGGAATCCTCGTGGTATCGCAAAAGTTATCGGGACCATGATCTCCTTAGCTGGTGTTTTGATTATGACACTGTACAAAGGACCCGTCATGAAAAATTTATGGCGTCCTCTAATTCACATTCCACGGAAAAGTGCTGCTATCACCGAAGACTGGTTAAAGGGTTCAATTCTTACAGTTTCAAGCTGTGTTGCGTGGTCTTTATGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCTGCTCAACTCTCACTCACCACGTGGATGAGCTTTGTTGGAGCAGCACAATCAGCTGTTTTTACTGTTATAATAGAACACGACTCTTCTGCATGGACTATGGGGCTAAACATTGACTTGTGGTCCACAATATATGGTGGAGTTGTAGTTGCTGGCTTCATAATCTACATTCAACTATGGTGCACTGAGAAAAGAGGACCAGTTTTTGTCACAATGTTTAACCCTCTTTCTACTATATTGGTGGCAATTCTAGCCTACTTTGTCTTTGGTGAGAAACTTTATCTGGGCAGCATCATAGGTTCAGTCATTGTCATAATTGGTCTTTACTTGCTGCTATGGGGCAAAGAACGTGACCAAGTGGTTTGCATGAAGAGCACAGATAAGTCACAGTGCAGTGCTGCAGACCCAGAATGCAGAATGTAG 939 0.4239 MSPHVYVTYRHIVATVVMFPFAYFLERDARPKLTFALLMEIFLLSLLGVSVTLNMYFASLNYTNPTFVASMVNTIASLTFIIAVVIRFEVVDVWNPRGIAKVIGTMISLAGVLIMTLYKGPVMKNLWRPLIHIPRKSAAITEDWLKGSILTVSSCVAWSLWYIMQASTLKRYPAQLSLTTWMSFVGAAQSAVFTVIIEHDSSAWTMGLNIDLWSTIYGGVVVAGFIIYIQLWCTEKRGPVFVTMFNPLSTILVAILAYFVFGEKLYLGSIIGSVIVIIGLYLLLWGKERDQVVCMKSTDKSQCSAADPECRM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02473 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 208 288 - -
Vimu3g02473 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 119 - -
Vimu3g02473 312 PANTHER WAT1-RELATED PROTEIN 1 296 IPR030184 GO:0016020|GO:0022857
Vimu3g02473 312 Pfam EamA-like transporter family 1 116 IPR000620 GO:0016020
Vimu3g02473 312 Pfam EamA-like transporter family 146 284 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02473 Vimu-Chr3 39234299 39236263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02473 1 293 Nodulin-like Gene Family AT5G07050 42.244 5.58e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02473 - - gmx:100527877 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02473 3 39234299 39236263 Vimu3g02473 3 39234299 39236263 ECH