Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu3g02418 | ATGGGATTCTATCTTAATCTCAAATTCAAGGCCTTTAGGTTGAAACGGTTTCTGCTTGGACATGGACGCAGAAAAAGAAAGCAGAAGATGGCAAAAAAGCCCTCATGGATGATGCCAATGACATATGGTTATCATGTGGTGGAACATAATATGAGCAGAGATGATTCTGATAACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGAATCAAACAGAGTTGTGGTATTTTGGAATCTTTGATGCACTGATTGGAGACAGGGTTAGCAAGTACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGACTCGTTTAAGCAGTAAAAGTAAGGAAGCTCTGAAGAGAGCTTACCATGGCGTAAGAGCAAAGATTCGAGAGGAATACAAATTAGAGGAGACATGTAGAATGGGTTCAGCATCTGTTATACTGATCAATGGAGAAAAACTTGTAATAGCCAACATGGGGAATTACAGAACTGTTGTGTGCAGAGATGGAATAGCTCATCAGACAACTGGCACATACCGACGATTAGAAAAAATGCACTGGTCTCGCCGACTCTTTGCAGGATGCATGCTGGGACGTCAATCAGGAAATGCAGCAGGTGCAAAACATTCTAGAGGCTCCGACTTTGTGATTAAAAGTGAAGTGCTTGATTCTGGTACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGTTTTGACTGA | 846 | 0.4113 | MGFYLNLKFKAFRLKRFLLGHGRRKRKQKMAKKPSWMMPMTYGYHVVEHNMSRDDSDNSDFDSVVAQREEMNQTELWYFGIFDALIGDRVSKYMQSHFFDKKLQETRLSSKSKEALKRAYHGVRAKIREEYKLEETCRMGSASVILINGEKLVIANMGNYRTVVCRDGIAHQTTGTYRRLEKMHWSRRLFAGCMLGRQSGNAAGAKHSRGSDFVIKSEVLDSGTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMTKSNISCLIIRFD | 281 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu3g02418 | 281 | SMART | PP2C_4 | 51 | 278 | IPR001932 | - | |
Vimu3g02418 | 281 | CDD | PP2Cc | 78 | 280 | IPR001932 | - | |
Vimu3g02418 | 281 | Gene3D | - | 44 | 281 | IPR036457 | - | |
Vimu3g02418 | 281 | PANTHER | PROTEIN PHOSPHATASE | 33 | 279 | IPR015655 | GO:0004722|GO:0006470 | |
Vimu3g02418 | 281 | SUPERFAMILY | PP2C-like | 36 | 281 | IPR036457 | - | |
Vimu3g02418 | 281 | Pfam | Protein phosphatase 2C | 220 | 273 | IPR001932 | - | |
Vimu3g02418 | 281 | Pfam | Protein phosphatase 2C | 66 | 173 | IPR001932 | - | |
Vimu3g02418 | 281 | ProSiteProfiles | PPM-type phosphatase domain profile. | 58 | 280 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu3g02418 | Vimu-Chr3 | 38716297 | 38719743 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu3g02418 | 1 | 280 | PP2C-type Phosphatase Gene Family | AT3G23360 | 45.775 | 1.70e-78 | 237 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu3g02418 | K19704 | - | gmx:100785227 | 460.685 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu3g02418 | 3 | 38716297 | 38719743 | Vimu3g02418 | 3 | 38716297 | 38719743 | ECH |