Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02351 ATGACATGCAAGTCTTGCAATCACGTGACCACCACTGATGATGTTGAAGACTGGGTGTACCACCAATTAGAGAACACCACTCATCTTTTACACGGCGTAGTCCACGGCAATGGATATGGGCACCTTCTACGGGTTAATGGCAGAGAAGGGGGATCTAGATTTCTTTCTGGTTGTCATATTATGGATTTCTGGGATCGCCTATGCAACACTCTTGGAGTCAGGGACACCCATGGTATGGTGACTGGGGTTATAGATTTGGCTCTGGTAGCTATTGTCTCACGCATGAAGCATACAAGTCTGCTGTTGAAAACCTATCCAACCTACCCTTGTCCAACTTTTCACAGGGACAGATGCCGGTACCTCATTCCCGTGTGCAGGACATGA 384 0.4766 MTCKSCNHVTTTDDVEDWVYHQLENTTHLLHGVVHGNGYGHLLRVNGREGGSRFLSGCHIMDFWDRLCNTLGVRDTHGMVTGVIDLALVAIVSRMKHTSLLLKTYPTYPCPTFHRDRCRYLIPVCRT 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02351 127 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 3 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02351 Vimu-Chr3 38002370 38004746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02351 21 74 PHD Transcription Factor Family AT5G22260 53.704 5.31e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02351 K26271 - gmx:100793400 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02351 3 38002370 38004746 Vimu3g02351 3 38002370 38004746 ECH