Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02348 ATGTTGTACAAATCATGTGTGAGGCCTTCAAAGGTCATCATGGCAAACTTTCTTACATTACTGCTTTTGTTTCTAATTCAAGTCTTTGCATATGGCTTCAGATACGGAGCAGATGGCTTGAACATGAACTACTACTTCATGACTTGCCCTTTCGTTGAACCTGTTGTTAAGAACACTGTCAACACAGCTTTGCTGGAAGACCCCACTCTCGCAGCTGCTCTTATCAGAATGCACTTTCATGACTGCTTCATTCAGGGATGCGATGGTTCGGTTTTGATTGACTCCACTGAGGATAATACAGCAGAAAAGGATTCTCCAGGAAATTTGAGCCTGCGAGGCTTCGAAGTCATAGATGCTATCAAAGAACAGCTTGAAATTCAATGCCCTGGTGTGGTTTCATGTGCTGATATTCTCGCCATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGAGGACCGGTATATGACATACCTAAAGGAAGAAAGGATGGAAGAAGATCCAAAATTGAGGATACTATAAATTTGCCATTCCCTACTTTCAATGCCTCTGAGCTCATTAGGTCGTTTGGCCAACGTGGTTTTTCTGCACAAGAGATGGTGGTTCTCTCTGGGGCTCATACACTGGGAGTGGCAAGTTGTGGTTCTTTCAAGAACAGGTTGAGCCAAGTGGATCAAACTTTGGACACAGAATTTGCCAAGACACTTGCGAGAACATGCAGTTCTGGTGACAACGCAAAGCAACCATTCGATGCGACGAATAACGATTTTGACAACGTTTACTTCAACGCTTTGTTGAGGAGAAACGGGGTTCTTACATCAGACCAAACACTGTACACAAGCCCCAAAACCAGGAACTTTGTGAACGCTTATGCATTCAACCAAGCCATGTTCTTTTTTGATTTCCAACAAGCAATGGTGAAGATGGGTCTGCTTGATGTCAAAGACAATTACAATGGTGAAGTACGACAAAATTGTCGCAAAATAAACTGA 987 0.4306 MLYKSCVRPSKVIMANFLTLLLLFLIQVFAYGFRYGADGLNMNYYFMTCPFVEPVVKNTVNTALLEDPTLAAALIRMHFHDCFIQGCDGSVLIDSTEDNTAEKDSPGNLSLRGFEVIDAIKEQLEIQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRSFGQRGFSAQEMVVLSGAHTLGVASCGSFKNRLSQVDQTLDTEFAKTLARTCSSGDNAKQPFDATNNDFDNVYFNALLRRNGVLTSDQTLYTSPKTRNFVNAYAFNQAMFFFDFQQAMVKMGLLDVKDNYNGEVRQNCRKIN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02348 328 CDD secretory_peroxidase 39 327 IPR033905 GO:0004601|GO:0042744
Vimu3g02348 328 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Vimu3g02348 328 Gene3D Peroxidase, domain 2 175 307 - -
Vimu3g02348 328 ProSiteProfiles Plant heme peroxidase family profile. 39 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 FunFam Peroxidase 43 180 - -
Vimu3g02348 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Vimu3g02348 328 SUPERFAMILY Heme-dependent peroxidases 39 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PANTHER PEROXIDASE 25-RELATED 23 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 Pfam Peroxidase 56 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 FunFam Peroxidase 175 307 - -
Vimu3g02348 328 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g02348 328 Gene3D - 43 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02348 Vimu-Chr3 37995076 37997155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02348 10 328 Peroxidase AT4G33420 68.025 8.76e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02348 K00430 - gmx:100776019 563.918