Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu3g02284 | CATTCATCCAATTCCAATCATGACATAAAAGTGAAGTTTCCATTTGATCTTAATGCTGAATTTGATGAGGAGGATTCAATTTCTCGCACTGAGGAAGCACGTCACAAAGTTGTTGAAACCATTCCAACTTTACCTTGTACTCATTCGGAGCTCACACCACAAGATGTTCCTCCTACAGACATGGACAATGAAGATAGAGCAAGTGTTGTCGAGGGAGGAACAGCTACCTCTGAAACCAGGGCCTACTACAAATGCACAAGTTCTGGGTGTTCTGTAAGGAAGCACGTGGAACGAGATTCGCGCAACAGAAAGAACGTAATCACTACTTACGAGGGAAAACACAATCATGAACAACCATCCCCTAAGAACCCTAACGAGAAACATTATGAAGAAGAAGAAGACGATGAAGATGAAGAAGATGACACAGAAGAACTTGCTACTGCTGCATCCAATGCTCTATGGAATTTTAGATTATCTGAGAGTATGAATTTTCTCAACACTCCACACCCTGCACAACATCGACTTCACACTCTTCAACTCTTTCGTAATGATACAAACCCTGGATTTGCCTACGCTGGGCCATCTGTTTGGCCTTTTGAAAGTTTCAACATGAATATTACGTCTTCTTCTTACACCACTCAAATGCATTATGCTTCTTTCTTGAACAGTACAAACACCATGCCTTACCGTTTCTATGGACTTGATCTTAACCGTTTTGCTGCCCCCCAAACTGAGTTTCCAATGCCACCACCCTTTAACGTTCCTTCTTCTTCTCAAGTCTTTTCTATTGGCTCCAGTTCAGTCTTTCCTTTAAGGGGTGCAATATATCGCAGACTGTAA | 840 | 0.419 | HSSNSNHDIKVKFPFDLNAEFDEEDSISRTEEARHKVVETIPTLPCTHSELTPQDVPPTDMDNEDRASVVEGGTATSETRAYYKCTSSGCSVRKHVERDSRNRKNVITTYEGKHNHEQPSPKNPNEKHYEEEEDDEDEEDDTEELATAASNALWNFRLSESMNFLNTPHPAQHRLHTLQLFRNDTNPGFAYAGPSVWPFESFNMNITSSSYTTQMHYASFLNSTNTMPYRFYGLDLNRFAAPQTEFPMPPPFNVPSSSQVFSIGSSSVFPLRGAIYRRL | 279 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu3g02284 | 279 | SUPERFAMILY | WRKY DNA-binding domain | 78 | 119 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02284 | 279 | Gene3D | WRKY domain | 69 | 120 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02284 | 279 | SMART | WRKY_cls | 74 | 118 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02284 | 279 | MobiDBLite | consensus disorder prediction | 130 | 145 | - | - | |
Vimu3g02284 | 279 | MobiDBLite | consensus disorder prediction | 109 | 145 | - | - | |
Vimu3g02284 | 279 | MobiDBLite | consensus disorder prediction | 109 | 129 | - | - | |
Vimu3g02284 | 279 | MobiDBLite | consensus disorder prediction | 41 | 75 | - | - | |
Vimu3g02284 | 279 | Pfam | WRKY DNA -binding domain | 77 | 117 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02284 | 279 | ProSiteProfiles | WRKY domain profile. | 80 | 119 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02284 | 279 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 79 | 139 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu3g02284 | Vimu-Chr3 | 37388035 | 37389704 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu3g02284 | 80 | 122 | WRKY Transcription Factor Family | AT5G56270 | 67.442 | 5.56e-14 | 70.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vimu3g02284 | WRKY | 6.3e-12 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu3g02284 | K18835 | - | vun:114191352 | 324.709 |