Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu3g02282 | ATGTTTTGTAGGGCCTACTACAAATGCACAAGTGTTGGATGTTCAGTAAAGAAGCACGTGGAACGTGATTCGCGTAACCAAAAAAACTTGATTAGTACTTATGAGGGAAGACACAATCACGAACAACCAAACCCTAGCAAAGAATATATACATGATGAAGAAGATGAACAACTTGCTGCTGTTGCTGCAGCCAATGCCCTATTGACTTTTGGATCACCTGGAAGTACTAGGAACTTTTTCAATACCCCAAACCTTCCAGAACCTCCAGTTCACACTCTCCAACTACTTCCTAATCACACAAATCCTGAATTTTTCAATATGTTCATCAGATCCAACCCTTTTGGAAGTTTCAACTATAACATGAATTTTGGGTCTTCCTACACTCCCCCAATGCATTACTCTTCTTTCTTGAATAATGTCATTACCATGCCTTTTGGACTTAACCTTGCTCCTTATGTTCCACCTCCATTTAACATTCCTTTTTCTTTTGAAGGTTTTTCTCAGGATTGGATGAGTGCTAATGGGTCCAGTTCAGTGTTTCGTTACTGA | 549 | 0.3953 | MFCRAYYKCTSVGCSVKKHVERDSRNQKNLISTYEGRHNHEQPNPSKEYIHDEEDEQLAAVAAANALLTFGSPGSTRNFFNTPNLPEPPVHTLQLLPNHTNPEFFNMFIRSNPFGSFNYNMNFGSSYTPPMHYSSFLNNVITMPFGLNLAPYVPPPFNIPFSFEGFSQDWMSANGSSSVFRY | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu3g02282 | 182 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 3 | 47 | IPR044810 | GO:0003700 | |
Vimu3g02282 | 182 | Gene3D | WRKY domain | 1 | 44 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02282 | 182 | SMART | WRKY_cls | 1 | 42 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02282 | 182 | SUPERFAMILY | WRKY DNA-binding domain | 2 | 43 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02282 | 182 | Pfam | WRKY DNA -binding domain | 2 | 41 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu3g02282 | 182 | ProSiteProfiles | WRKY domain profile. | 4 | 43 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu3g02282 | Vimu-Chr3 | 37381712 | 37382260 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu3g02282 | 4 | 124 | WRKY Transcription Factor Family | AT4G26640 | 32.283 | 7.46e-13 | 63.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vimu3g02282 | WRKY | 4.1e-10 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu3g02282 | K18835 | - | var:108323080 | 336.265 |