Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02269 ATGGAGTCTCATTTTGTGGCTCCCTTTCCATTGATGTTTCTGATAACTCTTTGGCTTTTACTGGCTCATCATGCCAAAGCTGAAAGTTCCACATATGTAGTTCACATGGACAAGTCGCTCATGCCTCAACTTTTTGCAAGCCATCATGATTGGTATGAGTCCATCATCCATTCCATAGACTTGGCAATAGCTGATGATCCATCAAAGCAACAGGAGCTGAAATTAGTGTACACTTACGATGATGCCATGCATGGATTCAGTGCAGTGTTATCATCAGAGGAGTTGGAGAGCCTAAAGAAAGTTGATGGCTTTGTGACAGCTTATCCTGACAGGTCTGCCACCATAGACACCACACACACCTTTGAGTTTCTGTCATTGGACACCCCCGGAGGAATATGGAATGCTTCAAATTTTGGGGAGGGTGTCATTGTGGGTCTCATAGACACTGGAATATGGCCTGAAAGTGACAGTTTCAGAGATGATGGCATGAGCAGAAATATCCCATCCAAATGGAAAGGAACATGCGAGCCAGGACAAGACTTTGATGCTTCCATCTGTAACTTCAAATTGATTGGAGCCAGGTACTTCAACAAGGGTGTGAAAGCAGCGAATCCTAATGTCACAATCAGCATGAACTCAGCGAGAGACACTCAGGGTCATGGAAGCCACACATCATCTACTGTTGCTGGCAATTATGTGAGTGGTGCCTCTTTCTTTGGCTACGCCAAAGGGGTAGCCAGAGGCGTTGCACCTCGAGCTAGGCTTGCCATGTATAAGGTCCTTTGGGATGAAGGGCGTCAAGCCTCTGATGTTCTTGCAGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTCATTTCCATTTCTTTGGGTTTTGACAGTGTTCCG 888 0.4606 MESHFVAPFPLMFLITLWLLLAHHAKAESSTYVVHMDKSLMPQLFASHHDWYESIIHSIDLAIADDPSKQQELKLVYTYDDAMHGFSAVLSSEELESLKKVDGFVTAYPDRSATIDTTHTFEFLSLDTPGGIWNASNFGEGVIVGLIDTGIWPESDSFRDDGMSRNIPSKWKGTCEPGQDFDASICNFKLIGARYFNKGVKAANPNVTISMNSARDTQGHGSHTSSTVAGNYVSGASFFGYAKGVARGVAPRARLAMYKVLWDEGRQASDVLAGMDQAIADGVDVISISLGFDSVP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02269 296 Gene3D Peptidase S8/S53 domain 141 293 IPR036852 GO:0004252|GO:0006508
Vimu3g02269 296 Pfam Subtilase family 139 291 IPR000209 GO:0006508|GO:0008236
Vimu3g02269 296 SUPERFAMILY Subtilisin-like 8 292 IPR036852 GO:0004252|GO:0006508
Vimu3g02269 296 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vimu3g02269 296 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Vimu3g02269 296 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 293 IPR045051 -
Vimu3g02269 296 ProSiteProfiles Serine proteases, subtilase domain profile. 120 296 - -
Vimu3g02269 296 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Vimu3g02269 296 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 115 IPR037045 -
Vimu3g02269 296 FunFam Subtilisin-like protease SBT1.9 21 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02269 Vimu-Chr3 37300422 37301663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02269 12 292 Subtilisin-like Serine Gene Family AT5G67090 44.056 2.55e-78 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02269 - - gmx:100806072 519.62