Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02195 TTGTTAGTAGTGTGTGTGTGTGTATGGCGTGTGTATTGCTTCGCTTCTCCTTCTCTTTCTCTTCATGCTCTCTTTTCTTTGTCTCGGTCTAACACCAACAACACCCAAACCCAACAACGACAACAACATTGGACGGTGCCAGGTTTATCTTTACGTAGTTTTTCTGCCAACAATCGAACCCCATCTGGGGATTTGGCCCCCAAAAGCCGCCACCTGAATTCCCACCCCAGATCCATATCGGTTCCACGTCGAATCCAACAGGGACAGAACCACCGTGGTGTGCTGTGGTTCACTTGGCAGGATTGGAATGCAAAGTTAATTAATTTATTCGTTATCGTAGCGATGGTGTCGAGTCAGGTGGTGAAAGTGAAGAGAGATACGCTACGACCATGCATGACATGCCCTCTCTGCCATAACTTCTACAAAGATGCCACCACCATCTCTCTCTGCCTTCACACCTGTTCGTCTCTCTTACCCTTCGATTTCTGTGCTCTTTTGATTTGTATGCTGCTCTTGAATTTATTTTTTTTCCCGGATTTTGACGTTGCTCCAGTTTACCTACCCCGCAATCTGCAATGCATTGCTCTTTGGTTTAATCCCTCTCGGTTCTTACTCATCCTTAGCAATAAGATTGACATGATAGCTGGGCTGACATGGTTTACTGGCTTTTTGTTGGTTGTTTGGATTTCTGTGATTTCACGGGATGCAGTGGATTTTCAAGATACGTTAGTTTGTATCATTCGAACACCAGTTTGCAGGAAGTGCATATATGATAAACTATCGGATGAGGAGTTGGATTGCTGTCCTGTGTGCAACATTGATTTAGGCTGCCTTCCGGTTGAAAAGCTCAGGCCAGACCATAATTTGCAAGATATAAGGGCAAAAGTATTCCCGTTTAAGAGAAAAAAGATCAAGGCCCAGGAAGTTTTGTCTTCAATATCATTGCCAACTAAAAGGAAAGAAAGATCACTTTCATCATTGGTAGTCAGTGCTCCCAAAGTTTCAATGCAACCCGGCTTTACAGGAAAGAGAACTAAAACCAGTACAAGAAAAGCTGCTGCTGCTTTACGTGGATGCAGTTTTCTTCTTGAAGAATCCATAAAGAAGGAAGAAACAAACGGTGAAGATAATATGGATCCTTCAATGGCCGAGCCTTCTAAAAAGCATAAGCCTAATGAAGACAAAGAGAACGGTGTGGAACATGGAGAAGGGAAGGTTGATCTCTGGACACCACTGAACTGTCTTGTTGAAGCTGCCAACCGAACAAAGTCCTCCAGGTCAAATTCACAAGCAACTCCTCTTGCCAAATTAGAGTCCCCATTTACTCCTCATGTGGGACAAAATATACCTGAAATTACAACCAAAACAGACCTACCTGCTTCTGTCCACAGTGAACTAAACATTCCAAAATCCAAAAATAAGGATACTGGACACAAAACAATATTAGGGGATGACAAGGATGCAAACAGCTTGCCTTCAGGACCAGTGAAGAGAAGAAGGTTGCGTCCTGCTGGTCAGAAAAGAGTTGCAGCATCTGAGATGTCTTCCTCATCCCCAGCTCCACTAAATGCAACAGGGAGCAAGTGCAACAGAAAAAATAGTCCTATCTGGTTTTCATTAGTTGCTTCAGAGGACCAGGATGGTACTGTGCCCGTCTCATTTATTCAAAAGTACCTTGTGAAGAAACTTAATCTTTCCAGTGAAGCAGAGGTGGAAATAATGTGCCGGGGTCAAACAGTGCTTCCATCATTACAACTGCATAATTTAGTAGATCTATGGTTCCGGACAGCCTCAACCTCGAAAAGGATACCAGCATCAGTGGGGTCCTCAGCCAAAGATTTTGTGATGGTTTTATCGTATTGTCGAAAGACATTGCCCCCTTGA 1884 0.4363 MLVVCVCVWRVYCFASPSLSLHALFSLSRSNTNNTQTQQRQQHWTVPGLSLRSFSANNRTPSGDLAPKSRHLNSHPRSISVPRRIQQGQNHRGVLWFTWQDWNAKLINLFVIVAMVSSQVVKVKRDTLRPCMTCPLCHNFYKDATTISLCLHTCSSLLPFDFCALLICMLLLNLFFFPDFDVAPVYLPRNLQCIALWFNPSRFLLILSNKIDMIAGLTWFTGFLLVVWISVISRDAVDFQDTLVCIIRTPVCRKCIYDKLSDEELDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKVFPFKRKKIKAQEVLSSISLPTKRKERSLSSLVVSAPKVSMQPGFTGKRTKTSTRKAAAALRGCSFLLEESIKKEETNGEDNMDPSMAEPSKKHKPNEDKENGVEHGEGKVDLWTPLNCLVEAANRTKSSRSNSQATPLAKLESPFTPHVGQNIPEITTKTDLPASVHSELNIPKSKNKDTGHKTILGDDKDANSLPSGPVKRRRLRPAGQKRVAASEMSSSSPAPLNATGSKCNRKNSPIWFSLVASEDQDGTVPVSFIQKYLVKKLNLSSEAEVEIMCRGQTVLPSLQLHNLVDLWFRTASTSKRIPASVGSSAKDFVMVLSYCRKTLPP 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02195 627 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 119 154 IPR044807 GO:0004842
Vimu3g02195 627 MobiDBLite consensus disorder prediction 468 485 - -
Vimu3g02195 627 MobiDBLite consensus disorder prediction 420 447 - -
Vimu3g02195 627 MobiDBLite consensus disorder prediction 465 527 - -
Vimu3g02195 627 MobiDBLite consensus disorder prediction 420 436 - -
Vimu3g02195 627 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 321 IPR013083 -
Vimu3g02195 627 MobiDBLite consensus disorder prediction 510 527 - -
Vimu3g02195 627 MobiDBLite consensus disorder prediction 369 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02195 Vimu-Chr3 36699352 36704189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02195 252 556 C3H Transcription Factor Family AT2G30580 38.720 1.16e-54 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02195 K16277 - gmx:100783999 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02195 3 36699352 36704189 Vimu3g02195 3 36699352 36704189 ECH