Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02137 ATGGAGTGCAACAAGGATGAGGCTGTGAGGGCTAGGCAAATGGCCGAAGCTAGAATGCAAAGTGGTGATTTTGTGGAGGCACTCAGATTGGCTACCAAGGCTAAAAAGCTGTATGCTGATATTGAAAACATTACTCAGATTCTTACCATCTGTGAGGTTCACAATGCTGCAAATAAAAAGGTCTCTGCCACTGACATGGACTGGTATGCGATACTTCAGATCGAAAGATTTGCTGATGAAGCAATCATAAAGAAACAGTACAGGAGGCTCGCACTGCTACTTCATCCTGACAAGAACAAGTATGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGGTCTTGAGTGACCAAGAAAAACGTTCTTTGTATGACAGCCGGTTCGGAATCTCTGTTAGAGGTGCTGCGAAGAAATCCACTGCAAAAAGTGGTGCAGAAAAATGCCAGAGAAGTTCTGAATCACAACGTAATTCACATGGGAATGTGTTCACTTCAAAGCGTGATGAACATGCAACAAATTATCCAAAGAATTCTTATCCTAACTTTGCTGATTCCAACAACCAAGCTGGGCCGACGACATTCTGGACAACTTGCCCACATTGTGGTTTTAAGTTCGAGTACTTAATACAATATGCGTATACGAACTTATTGTGTATGCAGTGCTTTAAATCATATAAAGCTAATGTTTTTAGTTTTGGTGCTCCACCGCCACAGCCAAAGTTTACTTCAGTAAATATCCCGAAAGAGGCTCCAATTCCTGGTCCCCCAAAACCAGATAGAGAACGTACTGCCAGGTTTGTGCGGTCAGATACTACATCTATGAAAAAATGTGCTGCTGGAGTTGGTGCTCATTGTGAAAAGAGTAAAGATGGCTCTGTTCCTGCATCCAAAGTCATGGAGCCACAATGCTCTAAAAATGTTGGAAGTAAGAGAGTAAGACAGTCAGCACCAGATTCAGGAAAAAACTTCAAAGATAGAAACAGTGGTGAGATGAGAGATGCTAATGTTCGAGAAAATGATATTGATCATTCAAGAGCTGGTGCAAGGAGATCTTCAAGGAAAAAACAGCGTGTTTCATACACGGAAACCTCTGAAGATGAAGATCTTGAATTTCCTTCCCAATCGCCACGACAAAATGAACCACATAAAACCGATAAAGTTGAGAATAAGACTGTTCCGTCAAGTAATGGAGCGTCCAACAGCAACAATCCAGCTACTTCAACTGCTGGTGTGGCTGATCAGAACACGGAGAATGTATCCGAGTCAAATGAGCATAACTGCTCTTCACCGGATTCAAATATTCCTTCTAGTCCAGACATCCTTTCTTGTTTTGACGCAGAATTCAATGATTTCGAAATGGACAAGGAGGCGGGTCGCTTTGCTGTTAATCAAATATGGGCAGTGTATGATGATAGCGGTGATGCGATGCCAAGATTTTATGCTATAGTCAAGAAAGTGTTTTCCCCTTTCATGTTGCAGATTACTTGGTTGGAGGCTGATCCACAATACAAAGAAGATCTTGATTGGCAGGATGCAGATTTGCCTATTGCCTGCGGTAAGTTCAGACTTGGCAGTTCTCAGAAAACTACAGATCGTACTATGTTCTCTCATCAGGTGCGGTGTGTAAAAGAAACTGGCAAAGGTTCTTATCTGGTATATCCCCGTAAAGGAGAAACATGGGCAATTTTCAGAGATTGGGACATAAAATGGAGTTCTGATCCAAATAAACATTTAGCGTATGACTATGACTACGTGGAGATCTTATCAGATTTCTCTGATAACGTGGTCATCGCTGTTGCCTATCTGGGCAAAGTGAAAGGATTTGTTAGCCTCTTTCAGCAAACTTCGGAGAATGGAGCAGCCAATTTTTATGTCCGGCCTCACGAGCTTTATAGGTTCTCGCATCAAATTCCTTCTTATAAGATGTCTGGTAATGAGAGGGAGGGTGTTCCAAGAGGATCTTTTGAATTTGATCCTGCAGCCTTGCCTTCTAATCTCTTTGAAGTTGGTGATTCGGGTAATTTGAAGATGAATAGCTGA 2049 0.4222 MECNKDEAVRARQMAEARMQSGDFVEALRLATKAKKLYADIENITQILTICEVHNAANKKVSATDMDWYAILQIERFADEAIIKKQYRRLALLLHPDKNKYAGAEAAFKLIGQANGVLSDQEKRSLYDSRFGISVRGAAKKSTAKSGAEKCQRSSESQRNSHGNVFTSKRDEHATNYPKNSYPNFADSNNQAGPTTFWTTCPHCGFKFEYLIQYAYTNLLCMQCFKSYKANVFSFGAPPPQPKFTSVNIPKEAPIPGPPKPDRERTARFVRSDTTSMKKCAAGVGAHCEKSKDGSVPASKVMEPQCSKNVGSKRVRQSAPDSGKNFKDRNSGEMRDANVRENDIDHSRAGARRSSRKKQRVSYTETSEDEDLEFPSQSPRQNEPHKTDKVENKTVPSSNGASNSNNPATSTAGVADQNTENVSESNEHNCSSPDSNIPSSPDILSCFDAEFNDFEMDKEAGRFAVNQIWAVYDDSGDAMPRFYAIVKKVFSPFMLQITWLEADPQYKEDLDWQDADLPIACGKFRLGSSQKTTDRTMFSHQVRCVKETGKGSYLVYPRKGETWAIFRDWDIKWSSDPNKHLAYDYDYVEILSDFSDNVVIAVAYLGKVKGFVSLFQQTSENGAANFYVRPHELYRFSHQIPSYKMSGNEREGVPRGSFEFDPAALPSNLFEVGDSGNLKMNS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02137 682 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vimu3g02137 682 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vimu3g02137 682 PRINTS DnaJ domain signature 123 142 IPR001623 -
Vimu3g02137 682 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vimu3g02137 682 SMART dnaj_3 66 123 IPR001623 -
Vimu3g02137 682 Pfam DnaJ domain 67 128 IPR001623 -
Vimu3g02137 682 MobiDBLite consensus disorder prediction 144 186 - -
Vimu3g02137 682 MobiDBLite consensus disorder prediction 288 441 - -
Vimu3g02137 682 Gene3D DnaJ domain 64 178 IPR036869 -
Vimu3g02137 682 CDD DnaJ 67 120 IPR001623 -
Vimu3g02137 682 MobiDBLite consensus disorder prediction 393 441 - -
Vimu3g02137 682 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vimu3g02137 682 Pfam Domain of unknown function (DUF3444) 443 649 IPR024593 -
Vimu3g02137 682 MobiDBLite consensus disorder prediction 148 164 - -
Vimu3g02137 682 SUPERFAMILY Chaperone J-domain 62 130 IPR036869 -
Vimu3g02137 682 MobiDBLite consensus disorder prediction 320 350 - -
Vimu3g02137 682 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02137 Vimu-Chr3 36210726 36212774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02137 47 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 32.796 2.50e-22 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02137 - - gmx:102662460 873.618