Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02134 ATGGTGGTTCCGCTGAATATGTGGGTTCTGATCTCAAATTTCAAGTTGGCATACAATCTTCTACGTCGTCCGGATGGCACTTTCAACCGGGACTTAGCAGAGTTCCTTGATCGGAAAGTTCCGGCAAATGCGAACCCCGTGGATGGAGTGTTCTCTTTTGATGTCATTGTTGACCGTGAAACCAATCTCCTTACGCGAATCTATCGTCCTGCCGAGGGAGAAGAGCGTCCGGTGAGCATTCTTGAGCTTGAGAAACCTGTGAGCTCTGAGGTTGTTCCTGTCATCATATTCTTCCATGGTGGAAGTTTTGCTCATTCTTCAGCCAATAGTGCCATATATGATACGCTATGTCGTCGCCTGGTTGGTATCTGTAAGGCCGTTGTGGTGTCTGTGAACTATAGGCGTGCACCTGAGAATAGGTATCCCTGTGCTTACGATGATGGGTGGACAGCTCTTAAGTGGGTTAGCTCTAGATCTTGGCTTCAGAGTCGGAAAGATAAGAAAGTTCATATCTACATGGCTGGGGATAGCTCGGGTGGGAACATTGTGCACCATGTTGCTCTCAAAGCTGTGGAGTCCGGAATTGAAGTGTTTGGGAATGTTCTGCTCAACCCATTGTTTGGTGGGCAGGAAAGATCCGAGTCGGAGAAGCGTTTAGATGGGAGATATTTTGTAAGAGTGAAGGATCGAGACTGGTATTGGAGGGCTTTTCTTCCTGAAGGGGAAGATAGAGACCATCCTGCATGTAACCCGTTTGGGCCAAAGGGGCAAAGCCTTGAAGGGACTGTCTTTCCCAAGAGCCTTGTAGTGGTTGCTGGTTTAGACCTTGTTCAGGACTGGCAACTGGGTTATGCCAAAGGGCTTGAGAAGGCTGGCCAGGAAGTGAAATTGCTATTCCTGGAGCAAGCAACCATTGGGTTTTACTTGCTGCCAAATAATGAGCACTTCTCTTCTGTTATGGACGAGATAAAATATTTTGTCAGCCCTGACTGTTGA 996 0.4769 MVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPAEGEERPVSILELEKPVSSEVVPVIIFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENRYPCAYDDGWTALKWVSSRSWLQSRKDKKVHIYMAGDSSGGNIVHHVALKAVESGIEVFGNVLLNPLFGGQERSESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHPACNPFGPKGQSLEGTVFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQEVKLLFLEQATIGFYLLPNNEHFSSVMDEIKYFVSPDC 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02134 331 Gene3D alpha/beta hydrolase 1 328 IPR029058 -
Vimu3g02134 331 PANTHER ARYLACETAMIDE DEACETYLASE 30 301 - -
Vimu3g02134 331 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 95 111 IPR002168 GO:0016787
Vimu3g02134 331 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 171 183 IPR033140 -
Vimu3g02134 331 Pfam alpha/beta hydrolase fold 95 308 IPR013094 GO:0016787
Vimu3g02134 331 FunFam Gibberellin receptor GID1 1 329 - -
Vimu3g02134 331 SUPERFAMILY alpha/beta-Hydrolases 32 324 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02134 Vimu-Chr3 36182261 36184436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02134 2 331 Carbohydrate Esterase AT3G05120 77.946 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02134 K14493 - gmx:100815161 650.203