Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02098 ATGGTTTCAGGTGCTGAATATGAACTCTTGAAAAGAAAGTACCTGGAGGAGTCCTCTGAGCGAAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGGAATATCAGAGTTTTCTGCAGATGTAGACCATTAAATGCAAGTGAAATTGCTAATGGGTCTGCTTCTGTTGTCAATTTTGAGTCGTCTTCAGATAATGAGCTTCAAGTCATTTGTGCAGAATCTTCTAAAAAGCAATTTAAATTCGACCATGTATTTGGGCCAGAAGATAACCAAGGTAACGAGAAGTTGCATCTTTTGTTGGTTTTGCAATGA 312 0.3878 MVSGAEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLNASEIANGSASVVNFESSSDNELQVICAESSKKQFKFDHVFGPEDNQGNEKLHLLLVLQ 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02098 103 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 92 IPR027640 GO:0003777|GO:0007018
Vimu3g02098 103 Pfam Microtubule binding 16 91 IPR031852 GO:0008017
Vimu3g02098 103 Gene3D Kinesin motor domain 2 94 IPR036961 -
Vimu3g02098 103 ProSiteProfiles Kinesin motor domain profile. 34 103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02098 103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 92 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02098 Vimu-Chr3 35855785 35856096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02098 2 93 Calmodulin-binding Proteins AT5G65930 30.435 1.58e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02098 K10406 - gmx:100817813 164.466