Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02097 ATGGGGGAAAATTTAATTAATGGCCAGAGAACAAAGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGAGTGGGAAAAACTGAAGCTGAGGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCTCTTTCAGCGCTTGGTGATGTTATTTCTGCCCTTGCTTCTAAATCAGCCCACATTCCATACAGGCAACTCGTTAGGTGGAGACTGCAAAACGTTAATGTTTGTGCAGGTAAGTCCAAGCGCAGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCCACCCGCGTCCGTGGAATCGAGGGTGGCCCAGCTCGCAAGCAAGTAGACCACACTGA 351 0.4758 MGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRQLVRWRLQNVNVCAGKSKRSRLGRDTLLTEFRHPRPWNRGWPSSQASRPH 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02097 116 PRINTS Kinesin heavy chain signature 63 84 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02097 116 PRINTS Kinesin heavy chain signature 14 32 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02097 116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 67 IPR027417 -
Vimu3g02097 116 ProSitePatterns Kinesin motor domain signature. 13 24 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu3g02097 116 ProSiteProfiles Kinesin motor domain profile. 1 67 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02097 116 Pfam Kinesin motor domain 10 67 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02097 116 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 67 IPR027640 GO:0003777|GO:0007018
Vimu3g02097 116 Gene3D Kinesin motor domain 2 87 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02097 Vimu-Chr3 35854108 35854680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02097 15 66 Calmodulin-binding Proteins AT5G65930 69.231 1.02e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02097 K10406 - gmx:100788477 130.183