Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02090 ATGGAAGTAGATGTTGATGGATCATTGTCATATCCTGAACCCCAGATGACTGCAAAAGACAGTGGTGAGAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATACGGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAACTTCCGCTTCCCTCATAAGATCCAGGCAACGGCCCTTATCTATTTTAAAAGATTCTATCTACAATGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACTTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCTGAGGAGCTTGGTAAGGGGATCTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAAGTTTGGAATTTGATCTAATTGTGTATGCACCATATCGCTCGGTTGAAGGTTTTATAATTGATATGGAGGAATTTTGCAATAGTGGTGATGATCAGCTTCAAATGCTTAAGTCTGTGTCTTGTAACATTTCCTCCCTCCCACCCCAAATTTATGTGACAATTGGTGGTTATTGGGCTACTTTGCAAGATACAGCAAGGTTGGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTCTTGGTAACTCAAATGCACTGCACAATGTCATTGACTTTGATAGTTATCTTGGGAGCATTTTTCAAGGTCAGAATTCCTTGCATACTATGGCCGAGCTTGCTGAATCACTGCATGCAATTGATTCCTGTGAATCGTGGTTTTCTTCTGTTTTACGTGTGGACCATTGTGGTATGCAGGTTAAAAAATACAAAATTCCTTCTGAGAAGGAATTGAAGCACATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGCTCTCATGACGAGTACTTCCTTCAACCTTATATTGAATTACATGCCGGTCCTAAAGATCTACCTAAAACAAAAAACCTGTTGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAGGAGCTCAAACGAGGCACAAAATATGGCATCTCTTGCCTAG 1056 0.4006 MEVDVDGSLSYPEPQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMISLEFDLIVYAPYRSVEGFIIDMEEFCNSGDDQLQMLKSVSCNISSLPPQIYVTIGGYWATLQDTARLEVDKMMLTDAPLLFPPGQLALAALGNSNALHNVIDFDSYLGSIFQGQNSLHTMAELAESLHAIDSCESWFSSVLRVDHCGMQVKKYKIPSEKELKHINRKLKSCWGHSSHDEYFLQPYIELHAGPKDLPKTKNLLGKKREKKSKHKSKRSSNEAQNMASLA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02090 351 Gene3D - 10 130 - -
Vimu3g02090 351 SMART cyclin_7 45 126 IPR013763 -
Vimu3g02090 351 PANTHER CYCLIN 24 340 IPR043198 GO:0006357|GO:0016538
Vimu3g02090 351 MobiDBLite consensus disorder prediction 315 351 - -
Vimu3g02090 351 FunFam cyclin-H1-1 21 130 - -
Vimu3g02090 351 CDD CYCLIN_AcCycH_rpt2 132 297 - -
Vimu3g02090 351 Pfam Cyclin, N-terminal domain 40 122 IPR006671 -
Vimu3g02090 351 Pfam Cyclin C-terminal domain 134 257 IPR031658 -
Vimu3g02090 351 SUPERFAMILY Cyclin-like 25 131 IPR036915 -
Vimu3g02090 351 MobiDBLite consensus disorder prediction 1 29 - -
Vimu3g02090 351 SUPERFAMILY Cyclin-like 134 298 IPR036915 -
Vimu3g02090 351 Gene3D - 132 257 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02090 1 254 Core Cell Cycle Gene Families AT5G27620 57.198 1.28e-96 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02090 K06634 - gmx:100800023 471.855