Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02082 ATGGATCACGCGCGATCGACCAACGGCGAGGACAATGCGGCGGGAATTCCGGACGACTTACGGTGCAAGAGGTCCGACGGAAAGCAGTGGCGGTGCACGGCCATGTCGATGCCGGATAAGACGGTGTGCGAGAAGCACTACATCCAGGCTAAGAAGCGCGCTGCGAATTCCGCAATGAGGGCCAACCTCAAGAAAGCCAAGAGGAAGTCGCAGTCGCTGAACGAGTCTGATTTTCGTTACACGCCCGAGCGTGACGCTCGAAGAGCCTCCTCTGCGAGACATGCTCATGACGAGATGGATGTGGATGTTGATGCTGATGCGGATGCAGATGCAGACGTGGATGTGGATGTGGATGTGGATGCGGATGCGGATGCTGATGTGGCGCTCTATGAAGAAGACAATTGGGTCTCCTATGATTCCCCGCCGGACTCCTCGCTCAAGAGATCGCGAAGGAGCTTGGATGCTAATGCCACCACTTTGCGTGCAATTTCTGTAGGATACCTATTACTGATTATCATCGACGGTGTCCAAATTGCTCATATGATTTGTGCCTTAATTGCTGTCGAGATCTTCGAGAAGCAACTGCAGATCACAATAAAGAACCTCAGACAGAGCTAG 618 0.5307 MDHARSTNGEDNAAGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKAKRKSQSLNESDFRYTPERDARRASSARHAHDEMDVDVDADADADADVDVDVDVDADADADVALYEEDNWVSYDSPPDSSLKRSRRSLDANATTLRAISVGYLLLIIIDGVQIAHMICALIAVEIFEKQLQITIKNLRQS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02082 205 MobiDBLite consensus disorder prediction 55 105 - -
Vimu3g02082 205 ProSiteProfiles WRC domain profile. 16 60 IPR014977 -
Vimu3g02082 205 MobiDBLite consensus disorder prediction 1 23 - -
Vimu3g02082 205 Pfam WRC 17 57 IPR014977 -
Vimu3g02082 205 MobiDBLite consensus disorder prediction 68 101 - -
Vimu3g02082 205 Coils Coil 56 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02082 17 57 GRF Transcription Factor Family AT3G13960 46.341 4.80e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02082 K15601 - gmx:100801287 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02082 3 35709389 35718203 Vimu3g02082 3 35709389 35718203 ECH