Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02043 ATGGCGCCAGAGCTAGCCTTGCCATTCTCTGTTGTATCTGTGGTCGAAGATGTTCTTCAGACGCACGGAAGCTGTTTAAGCGACATTCACTTGGCATCAAGGATGGCAGAAGAAGCTTCCTCAAGAAGGAATGAAGCAGCTGGGTGGCTAAGAAAGACAGTTGGAGTTGTTGGAGGCAAAGACATTCCAGATGAGCCTACTGAAGAAGATTTCAGGATTGCATTACGAAGTGGCATTGTCCTTTGCAATGCTCTTAACAAAATTCAACCCGGAGCAGTGCCCAAGGTAGTTGAAGTCCCCTGCGACAGTGTTATCATTCCTGATGGGGCACCTCTGTCTACTTACCAATACTTTGAAAATGTAAGGAATTTTCTGGTAACTATGGAAGAAATGGGGCTTCCCACCTTTGAAGTGTCTGATATAGAACAGGGAGGAAAATCTTCGAGGATAGTGAATTGTGTTTTAGCACTTAAGTCTTACAGTGAATGGAAACAGGGAGGAAAAAATGGGTCATGGAAATATGGTGGGAATCCAAAGCCACCTACCAATGCTAAACCAGCTATTATGGTGAAAGTCTCAGAACCATTCATGAGGTCTTTATCAAAGGGTAGTAGGTTAGGCGATAAAGATGGGTTACTGAATGATATTTCTACAAACAGTGAAGGGGGTTCTATACCCTCCCTGAATTTACTAATTCGTAAAATTTTATCTGATAAGAAGCTAGAAGAAATTCCCACTGTGGTGGAGTCTCTACTCAGCAGAGTCATGGAGGAGTTTGAAAAACGCTTGCTAATCCAACAAGAAATGTTCAAAACAACTCAAAACTATAAGGCAGTGCCTGAAGCAGAGGATTCCAAAGTGAAATCTGCTTGTAAGGGTGAAAAGATGGAACAAGATGAAGATGTGGTGGTTAAACACAAGGAATTTGTTGACGTGAAGGACAATGTCGATGAAGAACCAAACAGCCAGTATTTTAAGCAGCAAGAGTTATTTCAGCAGCAAAACGAGAACGTCCAGGAATTGAAAATGATGGTTCATCAAACAAAAACAGGAATGCAGGTTCTGCAAAATAAATACCAGGAGGATATGATCTATCTAAGTAAACACCTGCATGGCCTAGCTTCTGCTGCTTCAGGATATCAGAAAATTTTTGAAGAAAACCGCAAGCTTTATAATCAATTGCAAGACCTGAAAGGAAATATTAGGGTGTACTGTAGAGTTCGTCCCTCAAAAGGTGCCCAAGCAAATCATCATTGCTCTGTCAGTAACATAGATGAAGGAAGTATATCACTCATAGTGCCATCCAAAAACGGGAAAGACGGGAAGAAGACATTTAATTTCAACAGAGTCTTTGGTCCTTCTTCAACCCAAGCGGAGGTTTTCTCAGATACAAAACCACTGATTCGTTCGGTTCTTGATGGCTACAACGTGTGTATATTTGCTTATGGTCAGACAGGATCAGGAAAAACACACACTATGTCTGGACCAGACAATTATACTGAGGAAACAGTGGGTGTCAACTACCGCGCTCTGAAAGATCTTTTCCAAATCTCAGAGCAGAGAAAAGACACCATTCACTATGATATATCTGTTCAAATGCTTGAGATTTACAATGAACAAGTCAGAGATCTATTATCGACAGACAAAATCCGCAACAGTTCTCATAATGGCATTAACGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACTTCCGATGTCTTAAAGTTAATGAACTTGGGACAAAATAACCGGGCAGTTAGTTCTACTGCCATGAATGATCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCACGGAAGAGAGCTAGCATCAGGGAATAGTCTTCGTGGTTGTATCCACTTAGTTGACTTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAGGAGGCTCAACATATTAACAAGTCGCTTTCTGCATTAGGGGATGTAATTGCTTCGCTTGCCCAAAAGCAATCACACGTTCCTTATAGGAACAGCAAACTTACTCAGTTACTTCAAGATTCTCTCGGAGGCCAAGCAAAGACACTTATGTTTGTTCATGTTAGTCCCGAGCCAGATGCCATTGGAGAAACAATCAGTACATTGAAGTTCGCAGAAAGGGTATCCACTATTGAACTTGGTGCTGCTCGAGTTAACAAAGATAGTTCAGAGGTCAAAGAGCTTAAAGAACAGATTGCGATTCTAAAGGCAACCTCCGCCAGGAAGGATGGAGAATCGGAACAATTTCATCAGTCTGCAAATAGCATTTCTGAAACTCCAAAGTCCAAATCTCTATTGTCTTCCACTGCACGGTCTCCTAATTCGTCTCATGGAAATCGTAAGCCACCAAGGGAAGATTCCAGTAGCACGGTGGAGGACAAGAAAAAGGGTAGCCCGAAGCTCGCGAAAAGAGGAAGCCTTGACCCCTTGGACGTTCGTAGGAACTCACCACCTTGGCCACATCATGCAGAGGAAAACGGAAATGAGGATGATAAAGAATTGGTTTCTGGGGATTGTCTTGGTAAGCGTACAAAAAGGAATGGCCGCTTAAGTACTGAAAACAACCTCATGGGAGACTGTGATACAGAAAGCAAGCGGTCAGCTTCTCCAACGCTAAGTCCCTTGGATATTTTTTACCCTTCCAAAATATGCACGGAGGTGACCACCATAAATGACTGTGATGAGTTTGAGTTAGCAACCAGTGAAAGCTCAGAATCAGACAAGAGCTGGGAAGCACATGTACACGTACCAAAAGCAACCATTCTTTCCAACGGAGTAGCAGCTAAAACAAAAAAATCACCAAATCCAAGACAAGCCAAGAATCAAGAAAACAGGAGTAAGATCCCGTCATTGTCTCCTTCATCATCAAGGAGACAACCGACGGTAGTTAGTCAACAGAAAAAGCATCTAGATGCAAAAAGAAGAACTGGAAATGCCAAATGA 2970 0.4249 MAPELALPFSVVSVVEDVLQTHGSCLSDIHLASRMAEEASSRRNEAAGWLRKTVGVVGGKDIPDEPTEEDFRIALRSGIVLCNALNKIQPGAVPKVVEVPCDSVIIPDGAPLSTYQYFENVRNFLVTMEEMGLPTFEVSDIEQGGKSSRIVNCVLALKSYSEWKQGGKNGSWKYGGNPKPPTNAKPAIMVKVSEPFMRSLSKGSRLGDKDGLLNDISTNSEGGSIPSLNLLIRKILSDKKLEEIPTVVESLLSRVMEEFEKRLLIQQEMFKTTQNYKAVPEAEDSKVKSACKGEKMEQDEDVVVKHKEFVDVKDNVDEEPNSQYFKQQELFQQQNENVQELKMMVHQTKTGMQVLQNKYQEDMIYLSKHLHGLASAASGYQKIFEENRKLYNQLQDLKGNIRVYCRVRPSKGAQANHHCSVSNIDEGSISLIVPSKNGKDGKKTFNFNRVFGPSSTQAEVFSDTKPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPDNYTEETVGVNYRALKDLFQISEQRKDTIHYDISVQMLEIYNEQVRDLLSTDKIRNSSHNGINVPDANLVPVSSTSDVLKLMNLGQNNRAVSSTAMNDRSSRSHSCLTVHVHGRELASGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPEPDAIGETISTLKFAERVSTIELGAARVNKDSSEVKELKEQIAILKATSARKDGESEQFHQSANSISETPKSKSLLSSTARSPNSSHGNRKPPREDSSSTVEDKKKGSPKLAKRGSLDPLDVRRNSPPWPHHAEENGNEDDKELVSGDCLGKRTKRNGRLSTENNLMGDCDTESKRSASPTLSPLDIFYPSKICTEVTTINDCDEFELATSESSESDKSWEAHVHVPKATILSNGVAAKTKKSPNPRQAKNQENRSKIPSLSPSSSRRQPTVVSQQKKHLDAKRRTGNAK 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02043 989 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Vimu3g02043 989 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Vimu3g02043 989 Gene3D Kinesin motor domain 341 722 IPR036961 -
Vimu3g02043 989 SUPERFAMILY Calponin-homology domain, CH-domain 45 175 IPR036872 -
Vimu3g02043 989 ProSiteProfiles Kinesin motor domain profile. 400 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02043 989 FunFam Kinesin-like protein KIN-14I isoform A 395 762 - -
Vimu3g02043 989 MobiDBLite consensus disorder prediction 787 858 - -
Vimu3g02043 989 MobiDBLite consensus disorder prediction 927 989 - -
Vimu3g02043 989 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Vimu3g02043 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 753 IPR027417 -
Vimu3g02043 989 MobiDBLite consensus disorder prediction 749 885 - -
Vimu3g02043 989 Gene3D - 35 175 IPR036872 -
Vimu3g02043 989 CDD CH_AtKIN14-like 42 159 - -
Vimu3g02043 989 Pfam Kinesin motor domain 406 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02043 989 Coils Coil 727 747 - -
Vimu3g02043 989 SMART kinesin_4 398 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02043 989 MobiDBLite consensus disorder prediction 935 975 - -
Vimu3g02043 989 MobiDBLite consensus disorder prediction 758 786 - -
Vimu3g02043 989 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 950 IPR027640 GO:0003777|GO:0007018
Vimu3g02043 989 SMART ch_5 42 160 IPR001715 GO:0005515
Vimu3g02043 989 CDD KISc_C_terminal 398 722 - -
Vimu3g02043 989 PRINTS Kinesin heavy chain signature 474 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02043 989 PRINTS Kinesin heavy chain signature 590 607 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02043 989 PRINTS Kinesin heavy chain signature 621 639 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02043 989 PRINTS Kinesin heavy chain signature 670 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu3g02043 989 Coils Coil 380 400 - -
Vimu3g02043 989 MobiDBLite consensus disorder prediction 859 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02043 Vimu-Chr3 35331798 35338123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02043 388 756 Calmodulin-binding Proteins AT5G65930 41.799 6.91e-77 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02043 K10406 - gmx:100808197 1436.01