Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02023 GTGGAAGAGAGGAACTTGTTCTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGTTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAAGAGTCAAAAGGGAATGAGTTGAATGTTAAGGGCATGAGGGATTATAGGCACAAGGTCGAGAGGGAGATGTCTAATACTTACAATGCTATTAGGATAATTTTAGATGAGCATCTTATCCCATCCACAAATATCGCGGGGCCCACGATGTTTTATTATAAGATGAAAGGATATCACACAGCTGCTACCACTGTTGAGAGAGAATTACAACCTACACATTCTATTCGTTCGGGAGATGACTATGATATAATAGGGAGATCAAGTGACAACTATTTGTTTTTTGCT 378 0.4048 VEERNLFSVGYKNVVGSRRVSWRILSSIEQKEESKGNELNVKGMRDYRHKVEREMSNTYNAIRIILDEHLIPSTNIAGPTMFYYKMKGYHTAATTVERELQPTHSIRSGDDYDIIGRSSDNYLFFA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02023 126 Pfam 14-3-3 protein 2 88 IPR023410 -
Vimu3g02023 126 SMART 1433_4 1 126 IPR023410 -
Vimu3g02023 126 Gene3D - 1 92 IPR036815 -
Vimu3g02023 126 SUPERFAMILY 14-3-3 protein 1 107 IPR036815 -
Vimu3g02023 126 PANTHER 14-3-3 PROTEIN 1 88 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02023 Vimu-Chr3 35126127 35126507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02023 1 109 14-3-3 family AT1G26480 50.000 1.27e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02023 K06630 - gmx:547574 160.229