Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01964 ATGGCAGGTGACGGTACCGCTACATGCATAGACATCCTTCTTGCTATCATCTTGCCTCCTCTTGGAGTCTTTCTCAAATATGGCTGCAAGGTATTCATAAATTTTACATGTTTTTTTTTTCTTTTGCACAAAGATTTTTCAAGAAATTTTGGTTATTACTTTTTGTTTCGTGTTAGGGAATTTAGAGTGTGGCTAATACAATACATGGTTGACGGTTTGTCGCTGCAGGTGGAGTTCTGGATTTGTTTGGTGCTAACCCTTTTTGGTTATATACCTGGAATTATCTATGCTGTCTATGCCATCACCAAGTGA 312 0.3814 MAGDGTATCIDILLAIILPPLGVFLKYGCKVFINFTCFFFLLHKDFSRNFGYYFLFRVREFRVWLIQYMVDGLSLQVEFWICLVLTLFGYIPGIIYAVYAITK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01964 103 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016020
Vimu3g01964 103 Pfam Proteolipid membrane potential modulator 9 40 IPR000612 GO:0016020
Vimu3g01964 103 Pfam Proteolipid membrane potential modulator 75 101 IPR000612 GO:0016020
Vimu3g01964 103 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 6 103 IPR000612 GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01964 5 103 RCI2 Gene Family AT3G05890 42.424 4.94e-17 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01964 - - gmx:100306281 90.5077