Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01883 ATGGAACATTCTCTTTCTCCTTTGTTGTCAAATCTTCAAAGACTTTGGTTTTTTGTATGCTTAAAAGCCCTAATATCTAACTTGATTGCGAGATATTCAAAAAAACAAAGGCCAAAACTTCCCCCAGGTCCAAAGCCATGGCTTATGCTGGGCAACCTTCCTGAGATGCTTACAAAAAAACCTGCTCATCAATGGATACACAATCTCATGAAAGAAATGAACACTGAAATCGCCTGTATCCGCCTAGGAAATACCTATGTTATCCCAGTCACATGTCCCACCATTGCCAGACAGTTTTTGGGTGAACACGATGCAACTTTTGCATCAAGATCACTAACCACTTGCACTGATCTCGTTAGTAGCGGATATTTAACCACAATTTTAGTGCCATTTGGGGACCAATGGAAGAAAATGAAGAAAATCTTAACCAGTGCTTTGCTTTCCTCAGAAAAGCACCTATGGCTCCATGACAGAAGGACTGAAGAAGCTGACAACCTTATGTTTTACGTCTACAACAAAAGCAAAACTGTGAATAATGGTGTTGCTGGCCTTGTGAACATTCGAAGTGTTGCAAGGCATTATTGTGGCAACGTTATCAGGAAAATTGTTTTCAATAAAAGGTATTTTGGGAAAGGTAGGAAAGATGGAGGCCCTAGTTTTGAGGAGGAAGAACATGTTGATTCCATTTTCGTTTTACTTAGGTATCTTTACGCTTTTTCTATTTCTGATTATATCTCATGCTTGAGGAAACTTGACTTGGATGGACACCAGAAGAATGTTAAGGAAGCTTTGAAAGTGATAAAGAAATATCATGATCCCATCGTTGAAGAAAGACTTAAACAATGGAACGATACACCAAAGATTGATGAACATGACTGGCTTGATATTTTGATCTCCTTGAAAGATGCCAACAATAATCCATTATTGACATTGGAAGAAATTAATGCACAAATTGTGGAAATAATGATTGCAACAGTGGACAATCCATCAAATGCTTTTGAATGGGCACTCGCTGAAATGATAAACCAACCAAATTTGCTCGAACGAGCCATTGAGGAATTGGACAGTGTGGTGGGAAAAGAGAGGTTGGTTCAAGAATCAGATATACCAAAACTCAAGTATGTAAAAGCATGTGCAAGGGAAGCCTTTCGCCTTCATCCCATGGCACCTTTTAATCCTCCCCATGTCTCAATGAGTGGTACAACTGTGGGAAATTACTTCATCCCAAAAGGTAGCCATGTAATACTAAGTAGAAGAGATCTTGGAAGAAACCCAAAAGTGTGGAAAGAACCCCTCAAGTTTAAACCAGAACGTCACCTTAAGAGTGATAATGGGTCTAATGTAGTTTTGACAGAGCCAAATTTGAGGTTCATATCATTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTTTCGCTTGGGACCACAATGACCGTGATGTTATTTGCCAGGTTGCTCCATGGCTTCACTTGGACTGCACCATCCAATGTTTCTAAAGTAAACCTATGTGAGTCCAATGATGGTTTAAATCTTGCAGAGCCACTTATGGCAGTTGCTAAGCCCAGATTACAACCACAGTTATATCACCTTTAA 1590 0.3981 MEHSLSPLLSNLQRLWFFVCLKALISNLIARYSKKQRPKLPPGPKPWLMLGNLPEMLTKKPAHQWIHNLMKEMNTEIACIRLGNTYVIPVTCPTIARQFLGEHDATFASRSLTTCTDLVSSGYLTTILVPFGDQWKKMKKILTSALLSSEKHLWLHDRRTEEADNLMFYVYNKSKTVNNGVAGLVNIRSVARHYCGNVIRKIVFNKRYFGKGRKDGGPSFEEEEHVDSIFVLLRYLYAFSISDYISCLRKLDLDGHQKNVKEALKVIKKYHDPIVEERLKQWNDTPKIDEHDWLDILISLKDANNNPLLTLEEINAQIVEIMIATVDNPSNAFEWALAEMINQPNLLERAIEELDSVVGKERLVQESDIPKLKYVKACAREAFRLHPMAPFNPPHVSMSGTTVGNYFIPKGSHVILSRRDLGRNPKVWKEPLKFKPERHLKSDNGSNVVLTEPNLRFISFSTGRRGCPGVSLGTTMTVMLFARLLHGFTWTAPSNVSKVNLCESNDGLNLAEPLMAVAKPRLQPQLYHL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01883 529 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 16 528 - -
Vimu3g01883 529 SUPERFAMILY Cytochrome P450 41 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 CDD CYP79 75 522 - -
Vimu3g01883 529 Pfam Cytochrome P450 41 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 FunFam Cytochrome P450 9 33 525 - -
Vimu3g01883 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vimu3g01883 529 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01883 529 Gene3D Cytochrome P450 32 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01883 Vimu-Chr3 33785274 33787152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01883 8 527 Cytochrome P450 AT4G39950 52.975 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01883 - K14984 vra:106778952 917.531