Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01851 ATGAAGCAGGATTACGAGTGCAGAATGCGACTTGAGGGAATATTATCAGAAGGGATACGGAACATTATTGCTATGGAAGATGGAGAAAGAATGGTTAGAGATGTAAAGATAGATGTTTGGAGAAGATTCTTTGCAAGGTATAGAATGGTGGAGACTACATTTAGCGATTCATCATTGTACCAAGCTAACTTGGTTACCAAAAAATTTGAGTGTGGGAATTTCTGCACTGTGGAAAGAAACGGGAAATGCCTAATAATTGGATGGAAAGGAACCACAATTCATTCTATCTCAGCTTGGAAGTTTCTTTAA 309 0.3786 MKQDYECRMRLEGILSEGIRNIIAMEDGERMVRDVKIDVWRRFFARYRMVETTFSDSSLYQANLVTKKFECGNFCTVERNGKCLIIGWKGTTIHSISAWKFL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01851 102 ProSiteProfiles GRAS family profile. 1 100 IPR005202 -
Vimu3g01851 102 Pfam GRAS domain family 6 100 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01851 Vimu-Chr3 33286223 33286692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01851 8 101 GRAS Transcription Factor Family AT3G03450 28.723 6.69e-08 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu3g01851 GRAS 3.5e-13 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01851 - - gmx:102663581 160.229