Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01779 ATGATTCCCTTTTCCAGCATCCTGGGGTACGAAAAGTGTGACAGATACTTAATTTTTAGTAGAGAATCTGCCCTTGGGGATGGTTTTCGAGCATTTTTGTATTTTCTTGGCCTTGCTTACTGCTTTATCGGACTGTCGGCTATAACCGCTCGCTTCTTTCAATCGATGGAAAATGTGGTCAAACACACAAGGAAGGTAGTGGAGGTAGATCCTGTTACTAAAACTGAAACCATTAGACATGAAAAAGTTTGGAATTACACTGTTGCGGATATTAGCCTCTTGGCCTTTGGAACTAGCTTTCCCCAGATATCATTAGCCATCATTGATGCTATACAGAACATGGGGAATCTCTATGCTGGAGGTTTGGGGCCCGGAACACTTGTTGGTTCTGCTGCATTTGATCTTTTCCCCATCCACGCCATTTGTGTAGTAGTTCCAAAAGCAGGAGAGCTGAAGAAGATTGCTGATCTAGGGGTATGGCTGGTGGAGCTTTTTTGGTCATTTTGGGCTTATATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTTGTGACTCTGTGGGAGGCCTTGTTGACAGTACTACAATATGGATTACTATTGATCCATGCTTATGCTCAAGATAAACGTTGGCCTTATATTTCTCTACCCATTGCAAGAGATGAGAGGCCAGAGGATTGGGTACCAGAGGAGACTCCTTATTTTCAACAGGAAGTCTATCAGAAGATGAATTCCTCTGAGATAAAGCATGTTAGTGAAGAAAATCGCGATACTGTTGATATTTTTTCCATTCATTCAGAAAACCCCACTGATCCATTGTGTGTCACAGTACCTCAAACAGATGATGAGGCTGAAATTTTGGACAAAGCTAAGGAAACAACGTTGGAGGATACCCACTTGCTTACAATTTGGAGACAGCAATTTGTGGATGCACTAAGGTTGAAGAACCCAGAAGGAAAAAAATTAAAAAATATGTATCTCCGCCTAGCTCGAATTTTCTGGCAATTGCTACTTTTACCATGGAGATTTCTATTTGCTTTTGTTCCTCCTTGCCAAATTGCTCATGGATGGATCTCCTTCATTTGCTCCCTGCTTTTCATCAGCGGGATAGCTTACATTGTGACTAAGATCACAGAACTTATAAGTTGTGTTACAGGAATAAATGGTTACGTGATAGCATTTACAGCACTAGCCAGTGGAACCTCGTGGCCTGATCTAGTGGCAAGCAAGATTGCTGCTGAACGTCAAAAAACTGCTGATTCTGCAATTGCAAATATCACTTGCAGTAATTCAGTGAATATATATGTTGGAATTGGTGTTCCATGGCTTATTGATACTTTGTACAACTTCATAGCATATCGAGAACCTCTCAGAATCCAAAGTGCAGGGGGATTAAGCTTTTCACTGATTGTTTTCTTTTGCACTTCTGTCGGGTGTATATCAGTTTTGGTTTTCAGGCGTATAATTTTTGGAGCAGAGCTAGGAGGGCCTAGGCTCTGGGCATGGATTACCTGTGCTTTCTTCATGTTGTTGTGGATTATCTTTGTTGTACTATCTTCACTCAAGGTTTCTGGATTCATTTAG 1587 0.4115 MIPFSSILGYEKCDRYLIFSRESALGDGFRAFLYFLGLAYCFIGLSAITARFFQSMENVVKHTRKVVEVDPVTKTETIRHEKVWNYTVADISLLAFGTSFPQISLAIIDAIQNMGNLYAGGLGPGTLVGSAAFDLFPIHAICVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPYFQQEVYQKMNSSEIKHVSEENRDTVDIFSIHSENPTDPLCVTVPQTDDEAEILDKAKETTLEDTHLLTIWRQQFVDALRLKNPEGKKLKNMYLRLARIFWQLLLLPWRFLFAFVPPCQIAHGWISFICSLLFISGIAYIVTKITELISCVTGINGYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQSAGGLSFSLIVFFCTSVGCISVLVFRRIIFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01779 528 Gene3D - 86 220 IPR044880 -
Vimu3g01779 528 Gene3D - 319 522 IPR044880 -
Vimu3g01779 528 PANTHER SODIUM/CALCIUM EXCHANGER 12 285 - -
Vimu3g01779 528 Pfam Sodium/calcium exchanger protein 357 520 IPR004837 GO:0016020|GO:0055085
Vimu3g01779 528 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01779 5 528 Antiporters AT2G47600 71.132 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01779 K03452 - gmx:100792839 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01779 3 32275957 32280896 Vimu3g01779 3 32275957 32280896 ECH