Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01747 ATGGCGACAATTAAACTTCATGGAAGCCCCTTCTCAACAGCCACCATGCGAGCTACTGCTTCCCTGTACGAGAAGGAGGTTGAATTTGAGTTTGTTCACGTTGACATGAAAAATGGTGAACACAAAAAGGAACCCTTCATTTTGCTCAATCCATTTGGGCAAGTTCCAGCGTTTGAAGATGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACTCAATATATTGTTGATGAGTATGCTGATAAGGGGACCCAACTGATATGCAAGGAGTCGAAGAAGACGGCAATAGTGAGAATGTGGATGGAAATAGAGAGCCAAAGGTACGATCAAGCAGCTTCAAAACTTGTATGGGAGGTTGCAGTAAAGCCTATGTATGGGATTCCTACGGATCCGGCAGCTGTAGAAGAGACAGAAGGGAAACTAGGTACTATTCTTGATTTCTACGAGAAAACACTGTCTGAAAACAAATACTTGGCAGGTGAGTGTTTCACCTTGGCGGATCTGCATCACCTTCCCACCCTTCATTACTTGATGAACACACCGAGCAAGAAGTTGTTTGATTCACGACCACATGTTACTGCATGGATTGCTGATATTACAGCAAGACCAGCTTGGTCTAAGGTTCTTGCCATGCAGCCCAATCTAAGCAGTAAATAG 657 0.4368 MATIKLHGSPFSTATMRATASLYEKEVEFEFVHVDMKNGEHKKEPFILLNPFGQVPAFEDGDLKLFESRAITQYIVDEYADKGTQLICKESKKTAIVRMWMEIESQRYDQAASKLVWEVAVKPMYGIPTDPAAVEETEGKLGTILDFYEKTLSENKYLAGECFTLADLHHLPTLHYLMNTPSKKLFDSRPHVTAWIADITARPAWSKVLAMQPNLSSK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01747 218 SFLD Main.5: Phi-like 1 212 - -
Vimu3g01747 218 Gene3D - 90 214 - -
Vimu3g01747 218 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Vimu3g01747 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vimu3g01747 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Vimu3g01747 218 CDD GST_N_Phi 3 77 - -
Vimu3g01747 218 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 211 - -
Vimu3g01747 218 FunFam Glutathione S-transferase F2 88 209 - -
Vimu3g01747 218 CDD GST_C_Phi 92 209 IPR034347 -
Vimu3g01747 218 SUPERFAMILY GST C-terminal domain-like 82 211 IPR036282 -
Vimu3g01747 218 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Vimu3g01747 218 FunFam Glutathione S-transferase F2 3 87 - -
Vimu3g01747 218 Gene3D Glutaredoxin 1 87 - -
Vimu3g01747 218 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Vimu3g01747 218 Pfam Glutathione S-transferase, C-terminal domain 112 203 IPR004046 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01747 1 209 Glutathione S-transferase Gene Family AT1G02930 61.244 5.82e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01747 K00799 - gmx:100799868 382.104