Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01714 ATGAAGATCGGAATTTTGCTATGTTTTGCACTTTTTCTTGGGGTTTGTCAAGGAGGTCGCCTGAGGAACAATTTCTACCGCAATTCCTGCCCTCAAGCCGAGAACATCATTAAGAGTCAAACACAACAGCATGTGTCAGCTAATCCCAATTTGCCAGCCAAGTTGATTAGAATGCATTTTCATGATTGTTTTGTCAGGGGCTGTGATGCGTCGGTTTTGTTGAACTCTACTGCGAATAACACGGCAGAGAGGGACGCTATTCCAAATCTTTCTTTGGCTGGCTTTGATGTCATAGATGCCATAAAAAGTGAAGTGGAAGCAAAATGTCCGAATATTGTATCTTGTGCTGACATACTGGCATTGGCAGCAAGAGACGCTGTTTCTTTCCAATTTAATAAACCTATGTGGCAAGTTCTCACTGGTAGAAGAGATGGCACGGTATCGATAAGTAGCGAAGCCTTGGCAAATATCCCAGCACCTTTCTTCAACCTCACCCAACTCAGACAGAGTTTTGATAGAAAAGGTCTCGGTTTGAAGGATCTGGTTGTATTATCAGGGGCACACACAATTGGAGTTGGGCATTGCAACTTGTTCAGTAACAGGCTTTATAATTACACCGGGAAAGGTGATCAAGACCCTTCTTTGGATGACAGCTATGCTGCATTCTTGAAGACGAAATGCCAGAGTCTGAGTGACACAACCACAACGGTGGAAATGGACCCTGGAAGCTCGACCAATTTCGATAATCACTATTATACTAACCTTCGCCAGAAGAGGGGTCTGTTCCAGTCAGACGCTGCCCTTCTAACACTGCGTGCATCAGCAAATATGGCTCTAGAGTTGTTGGATTCAGCCGAATTCTTCACAGAGTTCGGACAATCAATGAAGAGAATGGGAAACATTGGGGTCCTCACTGGCTCTGCTGGAGAAATACGGAACAAGTGTTCTGTTGTCAACTCATAA 963 0.4434 MKIGILLCFALFLGVCQGGRLRNNFYRNSCPQAENIIKSQTQQHVSANPNLPAKLIRMHFHDCFVRGCDASVLLNSTANNTAERDAIPNLSLAGFDVIDAIKSEVEAKCPNIVSCADILALAARDAVSFQFNKPMWQVLTGRRDGTVSISSEALANIPAPFFNLTQLRQSFDRKGLGLKDLVVLSGAHTIGVGHCNLFSNRLYNYTGKGDQDPSLDDSYAAFLKTKCQSLSDTTTTVEMDPGSSTNFDNHYYTNLRQKRGLFQSDAALLTLRASANMALELLDSAEFFTEFGQSMKRMGNIGVLTGSAGEIRNKCSVVNS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01714 320 PANTHER PEROXIDASE 25-RELATED 12 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 Gene3D Peroxidase, domain 2 158 299 - -
Vimu3g01714 320 Pfam Peroxidase 38 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 CDD secretory_peroxidase 21 318 IPR033905 GO:0004601|GO:0042744
Vimu3g01714 320 ProSiteProfiles Plant heme peroxidase family profile. 20 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 Gene3D - 25 319 - -
Vimu3g01714 320 FunFam Peroxidase 158 298 - -
Vimu3g01714 320 FunFam Peroxidase 24 167 - -
Vimu3g01714 320 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g01714 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Vimu3g01714 320 SUPERFAMILY Heme-dependent peroxidases 21 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01714 Vimu-Chr3 31262995 31264574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01714 3 320 Peroxidase AT1G05260 58.025 1.09e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01714 K00430 - gmx:100806595 523.857