Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01702 ATGCTTGGGGTTCTAAAATTGGTAAGGGAGGTGAAAACAGAGATGACTGGCACTGATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTTGCTTACAATCTACTAAGACGTGCTGATGGAACGTTCAATCGAGAGTTGGCGGAATTCCTCGATCGCAAGGTCCCGGCCAACCCAATTCCTGTTGATGGGGTATTCTCTTTTGATCATGTTGATAGAAACACCGGCCTATTCAATAGGGTGTATCTAGTAGCTCCTCAAAAGGAGACTAGGTGCAACATAATAGAGCTGGAGAAGCCCCTGAGCACCACAGAGATAGTTCCTGTTATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCTAACAGTGCTATCTATGACACTTTCTGTCGCCGCCTTGTGAACCTTTGCAAGGCTGTGGTGGTTTCTGTAAACTACAGGCGATCGCCAGAGCATCGTTATCCATGTGCCTATGATGATGGCTGGGCAGCCCTCAAGTGGGTTAAGTCCAGGAAATGGCTTCAGTGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGCCGGTGATAGTTCTGGTGGTAACATTGCTCATCATGTGGCTGTGAGAGCTGCTGAAGAAGATATTGAAGTACTGGGCAATATTCTTCTCCACCCACTGTTTGGTGGGGAGAAGCGAACTGAGTCAGAGAAGAAACTGGATGGGAAGTACTTTGTGAGGCTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTTCCAGAAGGAGCAGATAGAGATCATCCAGCTTGTAACCCCTTTGGTCCCAAGGGTAAAAATCTTGCAGGCCTCAAGTTGCCCAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTGAAGAATTGTGGCCAAGATGTCAAACTTCTTTACCTTAAGGAGGCAACTATCGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATATCCTCATGGAGGAGATAAAGAACTTCGTCAATTCTAACTGTTAA 1077 0.4503 MLGVLKLVREVKTEMTGTDEVNLSESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANPIPVDGVFSFDHVDRNTGLFNRVYLVAPQKETRCNIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNLCKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRKWLQCGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKNLAGLKLPKSLVCVAGLDLLQDWQLEYVEGLKNCGQDVKLLYLKEATIGFYFLPNNDHFYILMEEIKNFVNSNC 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01702 358 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 198 210 IPR033140 -
Vimu3g01702 358 PANTHER ARYLACETAMIDE DEACETYLASE 57 329 - -
Vimu3g01702 358 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 122 138 IPR002168 GO:0016787
Vimu3g01702 358 Gene3D alpha/beta hydrolase 10 356 IPR029058 -
Vimu3g01702 358 Pfam alpha/beta hydrolase fold 122 335 IPR013094 GO:0016787
Vimu3g01702 358 SUPERFAMILY alpha/beta-Hydrolases 111 355 IPR029058 -
Vimu3g01702 358 FunFam Gibberellin receptor GID1 15 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01702 Vimu-Chr3 31165278 31167797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01702 15 356 Carbohydrate Esterase AT3G63010 75.510 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01702 K14493 - gmx:100804463 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01702 3 31165278 31167797 Vimu3g01702 3 31165278 31167797 ECH
Vimu6g02887 6 25465074 25466072 Vimu3g01702 3 31165278 31167797 ECH
Vimu6g02887 6 25465074 25466072 Vimu3g01702 3 31165278 31167797 PCT