Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01588 TTGCTATATTTCTTCAGAGCTGAGCAAACCTATGAGTATACGCCTCCTGAAGCTTTACTAAATGCTACATGGTATCAAGGGCCAACAAGCTCGACTTTGAAATATGACATGTGGAGCGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAGATGCTTTTCAGATAAATGCTTTAACACGGACTCTATTAGATCAACATCTAGAAGGCTGGAATGAGGGCGTGAGGGAGTTGGCATATAAGTGTTTTTCTGTTTCTGAAGATGTCTTGTTCACCAATTCACCAATTTGTTTGATGGGAACTAAGATCCAAGTTAGTTGCACTAATGGATTGGAGGTAGTTCAGTATTAG 354 0.4068 MLYFFRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPDAFQINALTRTLLDQHLEGWNEGVRELAYKCFSVSEDVLFTNSPICLMGTKIQVSCTNGLEVVQY 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01588 117 SUPERFAMILY Protein kinase-like (PK-like) 9 87 IPR011009 -
Vimu3g01588 117 Gene3D Transferase(Phosphotransferase) domain 1 5 93 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01588 6 88 PP2C-type Phosphatase Gene Family AT3G63340 65.060 7.14e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01588 - - vum:124828073 160.999