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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu3g01530
ATGGTGAATTCCGATATCCTCTCTGTCAAGAAGTTCAGTTTTCGAGGCGTCGATCTCGATGCTCTGTTGGACATGTCCACCGATGAACTCGTCAAGCTCTTCAGTGCACGCGCCCGTAGAAGATTTCAACGCGGTTTGACCCGCAAACCTATGGCACTAATCAAGAAGGTCCGTAAGGCGAAACGGGAGGCTCCAGCTGGTGAGAAGCCAGAGCCGGTGAGAACCCACCTCCGCAACATGATCATCGTGCCCGAGATGATAGGGAGCATCATTGGTGTTTACAATGGGAAAACCTTCAATCAAGTTGAAATTAAGCCGGAAATGATTGGGCATTATCTTGCCGAGTTTTCAATCTCTTACAAGCCTGTTAAGCATGGAAGGCCTGGTATAGGTGCCACCCACTCCTCTAGGTTTATTCCTCTGAAATGA
429
0.4895
MVNSDILSVKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKVRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
142
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu3g01530
142
Hamap
30S ribosomal protein S19 [rpsS].
38
131
IPR002222
GO:0003735|GO:0005840|GO:0006412
Vimu3g01530
142
PANTHER
RIBOSOMAL PROTEIN S19P FAMILY MEMBER
9
142
IPR002222
GO:0003735|GO:0005840|GO:0006412
Vimu3g01530
142
Gene3D
30s Ribosomal Protein S19; Chain A
5
142
IPR023575
GO:0003735|GO:0005840|GO:0006412
Vimu3g01530
142
Pfam
Ribosomal protein S19
40
125
IPR002222
GO:0003735|GO:0005840|GO:0006412
Vimu3g01530
142
PIRSF
RPS19p_RPS19a_RPS15e_RPS19o
2
142
IPR002222
GO:0003735|GO:0005840|GO:0006412
Vimu3g01530
142
SUPERFAMILY
Ribosomal protein S19
45
126
IPR023575
GO:0003735|GO:0005840|GO:0006412
Vimu3g01530
142
NCBIfam
30S ribosomal protein S19
9
142
IPR005713
GO:0003735|GO:0006412|GO:0015935
Vimu3g01530
142
ProSitePatterns
Ribosomal protein S19 signature.
95
119
IPR020934
GO:0003723
Vimu3g01530
142
FunFam
40S ribosomal protein S15
3
142
-
-
Vimu3g01530
142
PRINTS
Ribosomal protein S19 family signature
95
107
IPR002222
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu3g01530
Vimu-Chr3
28982497
28983333
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu3g01530
8
142
Cytoplasmic Ribosomal Protein Gene Family
AT5G09500
89.630
2.42e-87
249
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu3g01530
K02958
-
gmx:100801408
264.233
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vimu3g01530
3
28982497
28983333
Vimu3g01530
3
28982497
28983333
ECH
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