Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01519 ATGGAATCTGAAATTTTGTTTTGGTTACTTCTTCTGTTTGCAACTCCCCTATGGTTCTTAGCCACGATAGTATTTAAAGGCAAACCACCACCCTCTCCTCCTTCTTCCACGCCCCCCGCCGCCACCACCACCATTCCCAAAGTCTATCCTATCATCGGTTCAGTGCCGTCCATCATAGCAAACAAGCATCGACGCATAGACTGGACGTCCGACATACTCCATGCCTCCCCCTCTTCCACCTTCGTCCTCCACCGCGGCTTCGGCTCCCGCCATCTCTTCACAGCAAATCCTACTGTAGTGCACCACATTCTCAAGACCAACTTCCCACTCTACCAGAAGGGCCCAACCTTCAAATGCGCCCTTGACGATTTTCTCGGCCAGGGAATTTTCAACGCAGATGGCCCCGTCTGGAAACTTCAACGCCAAATCTCCAGCCATGAATTCAGTACTCAGAGCCTCCGCAAGTTCATCGAAACCGTCGTCGACGTGCAGCTCTCCGACCGCCTTCTTCCCCTTCTCGATGATGCATCCCGGAACAAAACCATCATCTCAGACTTCCAAGATACTCTCCAACGCTTCACCTTGGACAACATCTGCAAAATCGCTTGCGGCTTCGACCCCGAGTGCTTCCTCCGGGAAACTCCCTTCACCACCGCCATAACCGACGCCACAATAATCTGCAGTAAGAGACTACACGCGGCGTTCCCTCTGATTTGGAAAACCAAAAAAGTCCTTAACCTAGGCTCGGAGAAGCGGCTGAAGGAAGCGGTCTCGGAAGTGAAGGCTTTGGCAAGGAGAATAATAAGAGAGAAGAAAAAGGAGCTTGGGGAAAAGGAAACCCTAGATTCCGTGGATCTTTTGTCACGGTTTTTATGCTCAGGCCATTCGGACGAAGAATTCGTTATAGATATGATCCTCAGCTTTATCATCGCGGGAAGGGACACAACCTCAGGGGTGCTCACCTGGTTCTTCTGGCTCCTATCTAACCACCCGCACGTGGAGGAAGAGGTTGTAAAGGAGGTGACGCAGAAAGACACGGTGTACACACACGTGTGTGAGGAAATGAAAAACATGGTTTACACGCATGCAGCGTTGTGTGAGACCCTGAGGCTTTACCCACCCGTTCCGGCGAACTCGAAAGAGGCCATGCGCGATGATGTTTTACCAAATGGGAGTTTGGTGAAGAGAGGGTGGAGGGTGACGTATCATATTTACGCCATGGGGAGGTCGGAGAAGATTTGGGGTCCGGATTGGGCGGAGTTTCGGCCGGAGAGGTGGCTGACTTGGGAGGAGGTTGAAGGCAGGTGGAAGTTTGTGGCCGTTGATGCTTTTACTTATCCCGTGTTTCAGGCTGGTCCAAGGATCTGTTTGGGTAAGGAAATGTCGTTCTTGCAAATGAAACGAATTGTGGCCGGGATTTTGAGACGCTTTAAGGTGGTTTCCGAGGTGGCGGAACCCAAGTACGGTGGCTACTTCACTTCTTTCATGGTGGGTGGCTTCCCCGTCAGAATTCAGAATCGTAATTAA 1527 0.5134 MESEILFWLLLLFATPLWFLATIVFKGKPPPSPPSSTPPAATTTIPKVYPIIGSVPSIIANKHRRIDWTSDILHASPSSTFVLHRGFGSRHLFTANPTVVHHILKTNFPLYQKGPTFKCALDDFLGQGIFNADGPVWKLQRQISSHEFSTQSLRKFIETVVDVQLSDRLLPLLDDASRNKTIISDFQDTLQRFTLDNICKIACGFDPECFLRETPFTTAITDATIICSKRLHAAFPLIWKTKKVLNLGSEKRLKEAVSEVKALARRIIREKKKELGEKETLDSVDLLSRFLCSGHSDEEFVIDMILSFIIAGRDTTSGVLTWFFWLLSNHPHVEEEVVKEVTQKDTVYTHVCEEMKNMVYTHAALCETLRLYPPVPANSKEAMRDDVLPNGSLVKRGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLTWEEVEGRWKFVAVDAFTYPVFQAGPRICLGKEMSFLQMKRIVAGILRRFKVVSEVAEPKYGGYFTSFMVGGFPVRIQNRN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01519 508 CDD CYP86A 80 500 - -
Vimu3g01519 508 PANTHER CYTOCHROME P450 40 500 - -
Vimu3g01519 508 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 SUPERFAMILY Cytochrome P450 46 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 Gene3D Cytochrome P450 40 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01519 508 Coils Coil 253 273 - -
Vimu3g01519 508 Pfam Cytochrome P450 47 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01519 Vimu-Chr3 28710062 28711588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01519 41 507 Cytochrome P450 AT5G63450 44.609 5.62e-132 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01519 K20769 K20768 gmx:100781020 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02752 6 24084370 24086751 Vimu3g01519 3 28710062 28711588 PCT